Gene TK90_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0602 
Symbol 
ID8806347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp636920 
End bp638539 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003459853 
Protein GI289207787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.276335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGG TGCGCAACCT CCGCATTCGG CATCGCGACA GCGAGGCGCC GCTGGTCGAG 
GACATCAGCT TCTCGATCCG TGCAGGCGAG CTGTTCGCCC TGGTGGGCGA GTCGGGGTCC
GGCAAGTCGA TCACGGCGCT GGCGATCATG CGGCTGCTGG ACGGGGGCTT CGAGCCCTCC
ACGGGTGATG TCTGGCTGGC CGGGCACGGG ACCCGGCAGG AACTGCTGGG CCTGCCGGAC
CGCGTGATGC AGCAGGTGCG CGGGGATCGG GTGGGCATGA TCTTCCAGGA ACCGATGACC
TCGCTGAACC CGGTGCTGAC TGTGGGCGAC CAGATCGACG AGGTCCTGCG CCTGCACCGC
CCGCAGATGA CCCCGGCCGA GCGCGAGGCG CGGGTGCTCG AGGTGCTGCG CGAGGTCCAG
CTGCCAAACC CGGAACAGCG GCGCCACGAC TATCCGCACA AGCTTTCAGG GGGGCAACGT
CAGCGCGTGA TGATCGCGAT GGCGCTGGTG GCGGAGCCGG ATCTGCTGAT TGCCGACGAG
CCGACCACCG CGCTGGATGT GACCATACAG GCCGAGATCC TGAAGCTGAT CGATCAGCTG
CGCGAAAAGA ACGGGATGGC TGTGCTGCTG ATCACCCACG ATTTCGGCGT GGTCGCCTCG
GTGGCGGATC GCGTGGCGGT GATGCACAAG GGCCGGCTGG TGGAGCAGGG CGAGTGTCAC
CCGCTATTGC GCGACCCGCA GGATGCCTAC ACGCGCAAGC TGATCGGCGC CCTGCCGGAA
AACCTGCCGC CGTTGCCCTC GGTGCCTGGG GCCGGGCGCG AGACGTTGCT GGACGTGCGC
GATCTGCAGG TGCATTTTCC GGTGCTGAAG GGCCTGATGC GCCGCCAGGT GGATGTCGTG
CGCGCGGTGG ATGGCGTCTC GTTTCAGCTC GACAACGGCG AGGTGCTCGC GGTGGTCGGC
GAGTCGGGCT GCGGCAAGAC CACGCTGGGT CGCGCGATCC TGCGCCTGAT CGAGCCCACT
GGCGGCGAGA TCCGCTACCG CGACCAGCCA TTGACCGGGA TGCCGCGCAA ACCGTTGCGC
CGCCTGCGGC GTCATTTGCA GGTGGTGTTC CAGGACCCGG CCTCATCGCT GAACCCGCGC
CTGAACGTGA TGACGTTGCT GACCGAGCCC ATGGCGGTAC ACGGGATTGG CGAGGACCAG
GAGGATCGCA TCGAGCGTGC GCGCGCGACT CTGGACCAGG TCGCGCTACC GGCGGATACG
CTGTGGCGCT ATCCGCACGA GTTCTCGGGC GGCCAGCGCC AGCGCATCGG GATTGCCCGG
GCCCTGGTGC TGGATCCGGA CGTGATTATC TGCGATGAGG TGACCAGCGC GCTGGATGTC
TCGGTGCAGG CGGAGGTCCT GCAGATCCTC GGACGATTGC GGGTCGAACG CCGCCTGGCG
CTGATCTTCA TCACCCACGA CATGGGGGTG GTCGAGTATT TTTCCGACCG CATGCTGGTG
ATGCACGATG GCCGCATGGA GGAGATCGGC AACACCGCCG AGGTGCTGGC CAGTCCGCGG
GCCGAATACA CCCGTCACCT GCTCGAGGCG GTCCCGCGGG TTTCGCGCTA CGTGCATTAA
 
Protein sequence
MLEVRNLRIR HRDSEAPLVE DISFSIRAGE LFALVGESGS GKSITALAIM RLLDGGFEPS 
TGDVWLAGHG TRQELLGLPD RVMQQVRGDR VGMIFQEPMT SLNPVLTVGD QIDEVLRLHR
PQMTPAEREA RVLEVLREVQ LPNPEQRRHD YPHKLSGGQR QRVMIAMALV AEPDLLIADE
PTTALDVTIQ AEILKLIDQL REKNGMAVLL ITHDFGVVAS VADRVAVMHK GRLVEQGECH
PLLRDPQDAY TRKLIGALPE NLPPLPSVPG AGRETLLDVR DLQVHFPVLK GLMRRQVDVV
RAVDGVSFQL DNGEVLAVVG ESGCGKTTLG RAILRLIEPT GGEIRYRDQP LTGMPRKPLR
RLRRHLQVVF QDPASSLNPR LNVMTLLTEP MAVHGIGEDQ EDRIERARAT LDQVALPADT
LWRYPHEFSG GQRQRIGIAR ALVLDPDVII CDEVTSALDV SVQAEVLQIL GRLRVERRLA
LIFITHDMGV VEYFSDRMLV MHDGRMEEIG NTAEVLASPR AEYTRHLLEA VPRVSRYVH