Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0598 |
Symbol | |
ID | 8806343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 631176 |
End bp | 631982 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003459849 |
Protein GI | 289207783 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0757019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTTC TGAAGGGCAA GCGCGCGCTG ATTGTCGGCG TGGCCAGTAA CCGCTCCATC GCCTATGGCA TTGCCTCGGC CATGCATCGC GAGGGCGCCG AGCTCGCGTT CACCTATCAG AACGAGCGGC TGCGCGACCG CGTGGAGAAA CTGGTCGCCG ATTTCGACTC CGACATCCTC GTGCCCTGCA ACGTCGAGGA CGACCGCGAG ATCGAACAGG TCTTCGAGCG TCTGGACGAC TACTGGGACG GGATCGATAT CCTGGTCCAC TCGGTGGCCT TTGCCCCCAA GGAACAGCTC GACGGTGACT TCCTCGACAA CATGACCCGC GACGGCTTCC GCATCGCCCA TGATGTCAGC TCCTACAGCC TGGCGGCGCT GGCCAAGGCC GGGCGCGGCA TGATGAAAGA TCGCGAAGCC TCCATCCTGA CCCTGAGCTA CCTCGGGGCG GAACGCTCCA TGCCCAACTA CAATGTGATG GGCCTGGCCA AGGCCAGCCT CGAGGCCAAC GTCCGCTATC TCGCCTACAC CCTGGGCCCG GAGACCACGC GTGTGAATGC GATCTCCGCC GGCCCGATCC GCACACTGGC CGCCTCGGGC ATCGGCGAGT TCAAGCGCAT CCTCGACCAT GTCGAGGCCA ACGCACCGCT GCGCCGCAAC GTGACGACCG AACAGGTCGG CAATGCCGGG GCCTTCCTCT GCTCCGATCT GGCCTCCGGC ATCACCGGCG AGGTGATGTA CGTCGACTCG GGCTACAACA CCGTCGGCCT GGGCGCCGCC GAGATCGGGC TCGACAAGGA TAGTTAA
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Protein sequence | MGFLKGKRAL IVGVASNRSI AYGIASAMHR EGAELAFTYQ NERLRDRVEK LVADFDSDIL VPCNVEDDRE IEQVFERLDD YWDGIDILVH SVAFAPKEQL DGDFLDNMTR DGFRIAHDVS SYSLAALAKA GRGMMKDREA SILTLSYLGA ERSMPNYNVM GLAKASLEAN VRYLAYTLGP ETTRVNAISA GPIRTLAASG IGEFKRILDH VEANAPLRRN VTTEQVGNAG AFLCSDLASG ITGEVMYVDS GYNTVGLGAA EIGLDKDS
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