| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0597 |
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| Symbol | |
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| ID | 8806342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 629156 |
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| End bp | 631057 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_003459848 |
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| Protein GI | 289207782 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.261632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.152752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAG CAATTCGCGA CCGGGCGAGC GGCTGGCTCG CCTATGTGAT TATTGGCCTG
ATTACCATCC CCTTCGCTGT CTGGGGGCTC GGGGAATATT TCGGTGGTTC CGGTCCGCTG
GTCGCGGCCG AGGTCAACGG GACCGATATC CAGGTGCGCG ACGTGCACAA CGAGGCGCGC
GCACAGCGGG ACCAGATGGC CCGCATGTTC GGTGGCCAGA TCCCGGATGA CCTGCTCGAC
GAGGAGGGCA TCCGCATGCA GGCGCTGGAG ACCCTGATTC GCCAGGAACT GCTGCGCCAG
GCAGCCGACT CGGCGGGCTT CAAGGCCGCA GGAGACAGCA TCCTGCGGGA GATTCGCGGC
ATGCCGGTGT TCCAGGAGGG TGGCCAGTTC AGTCGCGAGC GCTATGCGCA GTTGCTCAAT
GCGCAGCGTC TGAGCCCGTC GGACTTCGAG CGCGACATCG GCCGATCGAT CATCCTGTCG
CAGCTCCAAG GCGGCATCCA GGCCACGGGC TTCCCGGCGG ACGCGCTGGT GGACGACTTC
AGTCGCCTGC GCAACCAGAC GCGTGTGGCC AGCTGGCGCA TCTTCCCGGT CGATGATTTC
GACCAGCCGG ACGTGGTCGA CGACAAGGCG ATCGAGGCCT ATTACGAGGC CAATCAGGAC
GATTTCACCA CCGAAGAGCG GGTACGTATC GCCTACCTGC AGCTCGACCC CGAGGCGCTG
GAAGACGCAG TGGATGTGTC CGAGGACGAT GTTCGCCAGC ACTACGAGGT GAACCGCAGC
CGCTATGAAG AGCCGGAGTT GCGCGAGGTG CGCCAGATCC GGATTCAGGA CACCGGCGAG
GAAGGCGAGG CAAAGATCAA CGAACTGCGC GATCGCCTGG ACGACGGCGA GGACTTTGCC
GAGCTGGCCG AAGCGTATTC CGAGGACAGC CTCAGTGCCG ACCGTGGCGG CAGCCTTGGC
GAGATCGCCC GCGGCGACCT GGATCGCACG CTCGAGACCA TCATCTTCAC GCTGCCGGAG
GGGCTGATCA GCCGCCCGGT GCGTACTGAC CGGGGCTGGT TCATCCTCGA GGTGACGTCC
ATCCAGGAGG CCCGACCGCA ACCGTTCGAG GATGTGCGGG ACGAGGTTGA ACGCGATCTT
CGCGACCGCA GCGCCGAACA GATGCAGATC GACGCCCTGG ATGACCTGAT GGGGCAGGCC
GCCGAATACC CGGACAGCCT GGAGCCGGCC GCCGAGGCGA CCCGTCTGGA GATCCAGACC
AGCGACTGGT TTACCCGCGG CTCCGGCGAC GGCATCGCCC AGCACCGTTC GATCCGCAAT
GCGGCCTTCG ATCCACGTGT GCTGGAGGAT GGTCACAACA GCGAGGCGAT CGACCTGCAG
GATGGCTCGA CTGTCGTGCT GCGAATCGAG GAGCACGAGC CGTCCGAGGT CCGTCCGCTG
GCCGAGGTCG AGGACGAGAT CCGCGAGCGT CTGCGGCGCG AGGCGGCCGC CGATGCCGCG
CGCGAAGCGG GTGAGGAACT GATCGCACGG CTGCGTGACG CCGACGACTG GGCGGATGCT
ATCGAGGATG ATGACGCCTG GCAGATGGAG CGCGAGGTGC GCCGGGATTC GCCGGTAGAT
GGCGATAACG GCGTGCCCGG TGGCTTGCAG CAGCACCTGT TCCGCCTGTC GGCCCCGGGA
GAGGACGCCG TCGAGATCAG CGGCACTCGT CTGGGGACTG GCGACTTCGC CGTCGCGATC
CTGCATGAAG TGCGGCTCGA CGAGCAGGAG GCGGATGCGG CGATGCGCCA GCAGGCCCGC
GAACTGATGC GCAATGCCTA TGCCAGCGCC GAGTTCCGCG CCTATCTGGC CTGGCTGGAA
TCCGAGGCGG ATATCACGCG TTATCCGGAA AACCTCGACT AG
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| Protein sequence | MLQAIRDRAS GWLAYVIIGL ITIPFAVWGL GEYFGGSGPL VAAEVNGTDI QVRDVHNEAR
AQRDQMARMF GGQIPDDLLD EEGIRMQALE TLIRQELLRQ AADSAGFKAA GDSILREIRG
MPVFQEGGQF SRERYAQLLN AQRLSPSDFE RDIGRSIILS QLQGGIQATG FPADALVDDF
SRLRNQTRVA SWRIFPVDDF DQPDVVDDKA IEAYYEANQD DFTTEERVRI AYLQLDPEAL
EDAVDVSEDD VRQHYEVNRS RYEEPELREV RQIRIQDTGE EGEAKINELR DRLDDGEDFA
ELAEAYSEDS LSADRGGSLG EIARGDLDRT LETIIFTLPE GLISRPVRTD RGWFILEVTS
IQEARPQPFE DVRDEVERDL RDRSAEQMQI DALDDLMGQA AEYPDSLEPA AEATRLEIQT
SDWFTRGSGD GIAQHRSIRN AAFDPRVLED GHNSEAIDLQ DGSTVVLRIE EHEPSEVRPL
AEVEDEIRER LRREAAADAA REAGEELIAR LRDADDWADA IEDDDAWQME REVRRDSPVD
GDNGVPGGLQ QHLFRLSAPG EDAVEISGTR LGTGDFAVAI LHEVRLDEQE ADAAMRQQAR
ELMRNAYASA EFRAYLAWLE SEADITRYPE NLD
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