Gene TK90_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0566 
Symbol 
ID8806307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp596560 
End bp597846 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content64% 
IMG OID 
ProductTol-Pal system beta propeller repeat protein TolB 
Protein accessionYP_003459817 
Protein GI289207751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.22163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC TGATTCACTG GATGCTGCCG GCCATGCTGC TGCTGTGGGC GGCGCAGGCA 
CAGGCCGTAT TGGAAGTCAC GGTCACCGAG GGCGTTACCG GGGCGATACC GGTAGCCGTT
GCGCCGTTTA CCTACGAGGG CGAGGGGGAA CTCGACGAGG ACATTTCCCA GATTGTCGCG
GCCAATCTGG CCCGTAGTGG GCTGTTCAAT GTCGAACAGG ACGATCTGCC CGCGGCCCCG
TCCGGACCGG CCGACTTTCT TGCCGGGCCC TGGGCCGACG CCGGGGTCGA GTATCTGGTC
GTGGGCAATC AGCGCCGTGA TGGCGATGAC GTCCTCGTGG AGTTTCACGT ATTTGATGTG
CTGTCCGAGG AACGCCTGGG TGGATGGCGC ATTCCGGTGC CTGGCGACAT GCTCCGGCGC
GGGGCGCATC GCATCTCGGA CATCATCTAC GAACAGATTA CCGGTGACCC GGGGGCATTC
AGTGCGCGTA TCGCGTTCGT GAGTGTGGAG CGTAACGGCG ACGAGCGGCG CTTTGCCCTT
GAGGTCGCCG ATTCCGACGG GGCCAATCCG CGCACCCTGT TTCGTTCCGC GAAGCCGATC
ATGTCGCCGG ACTGGTCGCC GGACGGGCGC GAATTGGTGT ACGTCTCGTT CGAGAATCGC
CGTTCCGAGG TCTATCGCCA GAATGTCGAG ACCGGCAGCC GCGAACGGGT GGCCAGCTTT
ACCGGCATTA ACAGTGCGCC TGCCTGGTCG CCCGATGGCC GTTATCTCGC ACTGAGCCTG
TCACGCGACG GTGCGCCGAA CATCTACCTG ATGGAACTGG AGACAGGCGA GATGCGCCAG
ATGACCCAGA CCCGCTCGAT CGAAACCGAG CCGGTCTGGT CGCCCGATGG CGAGACCCTT
TATTTCACCT CCGACCGTGC GGGTGCACCG CAGATCTATG CGCTGCCGCG GGAGGGGGGC
AGCCCCCGGC GTCTGACCTT CGAGAGCGGC TATGCGGCCG CCGCGACGGT TTCTCCGGAT
GGGCGCTATC TGGTCTATGT GCACGGTGGT GATGGCGGAT TCCAGCTGGC CCGTCTCGAT
TTGAACGACC GCCGTGTGAC CCGCCTCACG GAAGGGCGGG ACGCGGAATC GCCAAGCTTT
GCCCCGAATG GCAGCATGAT TATCTATGCG ATGACGGACG GCGGGCGTGG CGTGCTGGGC
TCGGTGAGTC AGGATGGACA GGTCCATCAG CGTCTCGCTG CCAGGGAGGG CGAGGTCCGT
GAACCGGCCT GGTCACCCTT GAATTGA
 
Protein sequence
MRRLIHWMLP AMLLLWAAQA QAVLEVTVTE GVTGAIPVAV APFTYEGEGE LDEDISQIVA 
ANLARSGLFN VEQDDLPAAP SGPADFLAGP WADAGVEYLV VGNQRRDGDD VLVEFHVFDV
LSEERLGGWR IPVPGDMLRR GAHRISDIIY EQITGDPGAF SARIAFVSVE RNGDERRFAL
EVADSDGANP RTLFRSAKPI MSPDWSPDGR ELVYVSFENR RSEVYRQNVE TGSRERVASF
TGINSAPAWS PDGRYLALSL SRDGAPNIYL MELETGEMRQ MTQTRSIETE PVWSPDGETL
YFTSDRAGAP QIYALPREGG SPRRLTFESG YAAAATVSPD GRYLVYVHGG DGGFQLARLD
LNDRRVTRLT EGRDAESPSF APNGSMIIYA MTDGGRGVLG SVSQDGQVHQ RLAAREGEVR
EPAWSPLN