Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0566 |
Symbol | |
ID | 8806307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 596560 |
End bp | 597846 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Tol-Pal system beta propeller repeat protein TolB |
Protein accession | YP_003459817 |
Protein GI | 289207751 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.22163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGACGAC TGATTCACTG GATGCTGCCG GCCATGCTGC TGCTGTGGGC GGCGCAGGCA CAGGCCGTAT TGGAAGTCAC GGTCACCGAG GGCGTTACCG GGGCGATACC GGTAGCCGTT GCGCCGTTTA CCTACGAGGG CGAGGGGGAA CTCGACGAGG ACATTTCCCA GATTGTCGCG GCCAATCTGG CCCGTAGTGG GCTGTTCAAT GTCGAACAGG ACGATCTGCC CGCGGCCCCG TCCGGACCGG CCGACTTTCT TGCCGGGCCC TGGGCCGACG CCGGGGTCGA GTATCTGGTC GTGGGCAATC AGCGCCGTGA TGGCGATGAC GTCCTCGTGG AGTTTCACGT ATTTGATGTG CTGTCCGAGG AACGCCTGGG TGGATGGCGC ATTCCGGTGC CTGGCGACAT GCTCCGGCGC GGGGCGCATC GCATCTCGGA CATCATCTAC GAACAGATTA CCGGTGACCC GGGGGCATTC AGTGCGCGTA TCGCGTTCGT GAGTGTGGAG CGTAACGGCG ACGAGCGGCG CTTTGCCCTT GAGGTCGCCG ATTCCGACGG GGCCAATCCG CGCACCCTGT TTCGTTCCGC GAAGCCGATC ATGTCGCCGG ACTGGTCGCC GGACGGGCGC GAATTGGTGT ACGTCTCGTT CGAGAATCGC CGTTCCGAGG TCTATCGCCA GAATGTCGAG ACCGGCAGCC GCGAACGGGT GGCCAGCTTT ACCGGCATTA ACAGTGCGCC TGCCTGGTCG CCCGATGGCC GTTATCTCGC ACTGAGCCTG TCACGCGACG GTGCGCCGAA CATCTACCTG ATGGAACTGG AGACAGGCGA GATGCGCCAG ATGACCCAGA CCCGCTCGAT CGAAACCGAG CCGGTCTGGT CGCCCGATGG CGAGACCCTT TATTTCACCT CCGACCGTGC GGGTGCACCG CAGATCTATG CGCTGCCGCG GGAGGGGGGC AGCCCCCGGC GTCTGACCTT CGAGAGCGGC TATGCGGCCG CCGCGACGGT TTCTCCGGAT GGGCGCTATC TGGTCTATGT GCACGGTGGT GATGGCGGAT TCCAGCTGGC CCGTCTCGAT TTGAACGACC GCCGTGTGAC CCGCCTCACG GAAGGGCGGG ACGCGGAATC GCCAAGCTTT GCCCCGAATG GCAGCATGAT TATCTATGCG ATGACGGACG GCGGGCGTGG CGTGCTGGGC TCGGTGAGTC AGGATGGACA GGTCCATCAG CGTCTCGCTG CCAGGGAGGG CGAGGTCCGT GAACCGGCCT GGTCACCCTT GAATTGA
|
Protein sequence | MRRLIHWMLP AMLLLWAAQA QAVLEVTVTE GVTGAIPVAV APFTYEGEGE LDEDISQIVA ANLARSGLFN VEQDDLPAAP SGPADFLAGP WADAGVEYLV VGNQRRDGDD VLVEFHVFDV LSEERLGGWR IPVPGDMLRR GAHRISDIIY EQITGDPGAF SARIAFVSVE RNGDERRFAL EVADSDGANP RTLFRSAKPI MSPDWSPDGR ELVYVSFENR RSEVYRQNVE TGSRERVASF TGINSAPAWS PDGRYLALSL SRDGAPNIYL MELETGEMRQ MTQTRSIETE PVWSPDGETL YFTSDRAGAP QIYALPREGG SPRRLTFESG YAAAATVSPD GRYLVYVHGG DGGFQLARLD LNDRRVTRLT EGRDAESPSF APNGSMIIYA MTDGGRGVLG SVSQDGQVHQ RLAAREGEVR EPAWSPLN
|
| |