Gene TK90_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0563 
Symbol 
ID8806304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp594354 
End bp595046 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content64% 
IMG OID 
Productprotein TolQ 
Protein accessionYP_003459814 
Protein GI289207748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.533269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGTCG ACTTTTCGAT GTACCAGCTG GTGATGGAGG CGACCCTGGT GGTCCAGCTG 
GTGATGGTGA TTCTGGTGCT CGCCTCCGTA CTCTCCTGGC TGGCGATTAT CGTCAAGGCC
AGATCCCTGA ACGCGGCGCA CCGCGCCTGC GATGATTTCG AGGAGCGCTT CTGGTCGGGG
GCCGATCTGT CTCACCTCTA CGAAGGGGTG CGGCGCAAGC AGGAAATGAC GGGCATGGAG
CACGTCTTCT CCTCTGGGTT CAAGGAATTT CTGCGTGCGC GCCAGCATGG CATCCCGGCC
GGTGAGCCCG CCCAGCGCGC CATGCGTGTG GCGATCGCAC GCGAGATTGA CGAGATGGAG
CGTTATCTGC AGTTCCTCGC CACGGTGGGG TCGACCAGCC CGTATATCGG CCTGTTCGGC
ACGGTCTGGG GCATCATGCA TGCCTTCCTG GGGCTTTCCG GGGTGCAGCA GGCGACCCTT
GCGATGGTGG CACCCGGCAT TGCGGAGGCA CTGATTGCCA CGGCGCTGGG CCTGTTCGCT
GCGATCCCGG CCGTGATCGC CTACAACCGC TTTGCGGGGG ATGTCGACCG CGTGGCCGTG
CGCCTGGAGA ACTTCAATGA CGAGTTCGTG GCCCTGCTCA ACCGACAGGT GCACGCGAAG
TCCACGGATA CGGCCTCCGA GGCCACGGCC TGA
 
Protein sequence
MAVDFSMYQL VMEATLVVQL VMVILVLASV LSWLAIIVKA RSLNAAHRAC DDFEERFWSG 
ADLSHLYEGV RRKQEMTGME HVFSSGFKEF LRARQHGIPA GEPAQRAMRV AIAREIDEME
RYLQFLATVG STSPYIGLFG TVWGIMHAFL GLSGVQQATL AMVAPGIAEA LIATALGLFA
AIPAVIAYNR FAGDVDRVAV RLENFNDEFV ALLNRQVHAK STDTASEATA