Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0552 |
Symbol | |
ID | 8806293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 586089 |
End bp | 586826 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_003459803 |
Protein GI | 289207737 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.414989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGTA CCACCGGACC CGCAAACCCG GAGTCCCTGC CACGCCTGGT TATCCTGATC TCCGGGCGCG GCAGCAACCT CGGCGCCCTG ATCAAGGCCT GCAACAGTGG CCACATTCAG GCCCGGATCG TCGGCGTCAT CAGCAACCGC CCTGACGCAG GCGGGCTGGC CTACGCCAAA CAGCACGCGA TCCCGGCACG CGTCCTGAAC CACCGCGACT ATCCATCGCG CGAGGCCTTT GACGCAGACC TGGCCGAGAC GATCGAGGCC TTTGACCCCG ATCTCGTGAT CCTGGCCGGC TTCATGCGCA TCCTGACCCC CGGATTCGTC GATCGCTTCA CGGGACGGCT GTTGAACATT CACCCCTCCC TGTTGCCGAA GTACCGTGGG CTGGACACAC ATGCCCGCGC GCTGGCCGAC GGGGAGGACG AACACGGCGC CAGCGTGCAT TTTGTCACCC CCGAACTGGA CGGCGGCCCG GTGATCATGC AAGCCCGCGT GCCGGTCCTG CCCGATGACA CGCCGGAGAG CCTCGCCACC CGTGTCCAGC GCGCCGAACA CCGGCTGTAT CCCGAGGTCG TGCGGCGCCT GTGTTCAGGG GAAATTCAGT GGCGCGACCG CATCGTGACC GGGGACGACA CCCCGCTGAC GGTCCCGCTG CAGCTCGAAA CCAATGAGGT AGTACCCGAT GTTGAAGCTC CCGAGGAACG GAGCCCTGTG CCGCGCGACG CGGACTAG
|
Protein sequence | MSSTTGPANP ESLPRLVILI SGRGSNLGAL IKACNSGHIQ ARIVGVISNR PDAGGLAYAK QHAIPARVLN HRDYPSREAF DADLAETIEA FDPDLVILAG FMRILTPGFV DRFTGRLLNI HPSLLPKYRG LDTHARALAD GEDEHGASVH FVTPELDGGP VIMQARVPVL PDDTPESLAT RVQRAEHRLY PEVVRRLCSG EIQWRDRIVT GDDTPLTVPL QLETNEVVPD VEAPEERSPV PRDAD
|
| |