Gene TK90_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0552 
Symbol 
ID8806293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp586089 
End bp586826 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003459803 
Protein GI289207737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.414989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTA CCACCGGACC CGCAAACCCG GAGTCCCTGC CACGCCTGGT TATCCTGATC 
TCCGGGCGCG GCAGCAACCT CGGCGCCCTG ATCAAGGCCT GCAACAGTGG CCACATTCAG
GCCCGGATCG TCGGCGTCAT CAGCAACCGC CCTGACGCAG GCGGGCTGGC CTACGCCAAA
CAGCACGCGA TCCCGGCACG CGTCCTGAAC CACCGCGACT ATCCATCGCG CGAGGCCTTT
GACGCAGACC TGGCCGAGAC GATCGAGGCC TTTGACCCCG ATCTCGTGAT CCTGGCCGGC
TTCATGCGCA TCCTGACCCC CGGATTCGTC GATCGCTTCA CGGGACGGCT GTTGAACATT
CACCCCTCCC TGTTGCCGAA GTACCGTGGG CTGGACACAC ATGCCCGCGC GCTGGCCGAC
GGGGAGGACG AACACGGCGC CAGCGTGCAT TTTGTCACCC CCGAACTGGA CGGCGGCCCG
GTGATCATGC AAGCCCGCGT GCCGGTCCTG CCCGATGACA CGCCGGAGAG CCTCGCCACC
CGTGTCCAGC GCGCCGAACA CCGGCTGTAT CCCGAGGTCG TGCGGCGCCT GTGTTCAGGG
GAAATTCAGT GGCGCGACCG CATCGTGACC GGGGACGACA CCCCGCTGAC GGTCCCGCTG
CAGCTCGAAA CCAATGAGGT AGTACCCGAT GTTGAAGCTC CCGAGGAACG GAGCCCTGTG
CCGCGCGACG CGGACTAG
 
Protein sequence
MSSTTGPANP ESLPRLVILI SGRGSNLGAL IKACNSGHIQ ARIVGVISNR PDAGGLAYAK 
QHAIPARVLN HRDYPSREAF DADLAETIEA FDPDLVILAG FMRILTPGFV DRFTGRLLNI
HPSLLPKYRG LDTHARALAD GEDEHGASVH FVTPELDGGP VIMQARVPVL PDDTPESLAT
RVQRAEHRLY PEVVRRLCSG EIQWRDRIVT GDDTPLTVPL QLETNEVVPD VEAPEERSPV
PRDAD