Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0548 |
Symbol | |
ID | 8806289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 581597 |
End bp | 582259 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | ribose 5-phosphate isomerase |
Protein accession | YP_003459799 |
Protein GI | 289207733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.231532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGG ACGAAATGAA GAAGGCGGTC GCCGAGGCCG CGCTCGAACG CATCGAAAGC GGCTGGATCG TGGGTGTCGG CACCGGCTCG ACCGCGAACT ACTTTATCGA TGCCCTGGCC CGGATCAAGG GCAAGATCGA CGGTGCAGTG GCCTCCAGCG AGGCCAGCGC GGAACGCCTG CGCGGGCACG GGATCGAGGT CCTGGACCTG AACTCCGCCG GCCCCCTTCC GATCTATGTC GACGGGGCTG ACGAGGCCAC CCGGCACCTG CACCTGACCA AGGGCGGGGG CGGTGCGCTA ACCCGCGAAA AGATCGTCGC GGCGGCGTCC AAGACCTTCG TCTGCGTCGT GGACGAGACC AAGGTCGTGG ATTACCTGGG GGCCTTCCCG CTGCCGGTCG AGGTGATCCC GATGGCGCGC AGCCATGTGG CCCGTGCCCT GTCGAAGCTG GGCGGAAACC CGGAGCTGCG CGAGGGCTTC AAGACCGACA ACGGCAATGT AATCCTCGAC GTTCACAACC TGCGTATCAT GAATCCGGTG GAGCTGGAGT CGGAGCTGGA CCATATCGCC GGCGTCGTCA CCAACGGCCT GTTCGCCCGC CGCCCGGCGG ACGTGATGCT CGTGGGCTCG CCCGCAGGCG TCGAGGAGAT GACCGCCAAG TAA
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Protein sequence | MTQDEMKKAV AEAALERIES GWIVGVGTGS TANYFIDALA RIKGKIDGAV ASSEASAERL RGHGIEVLDL NSAGPLPIYV DGADEATRHL HLTKGGGGAL TREKIVAAAS KTFVCVVDET KVVDYLGAFP LPVEVIPMAR SHVARALSKL GGNPELREGF KTDNGNVILD VHNLRIMNPV ELESELDHIA GVVTNGLFAR RPADVMLVGS PAGVEEMTAK
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