Gene TK90_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0539 
Symbol 
ID8806279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp571812 
End bp572273 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003459790 
Protein GI289207724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00419696 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTT TCCGCAAATC CGCTCTTGCA ATCGCGATGA GTTCCCTCTT TGCCCTCGGC 
GGTCTGAGCG CCGCGCAAGC CATGGGCGAA GGTGCCGAGG CGCCGGATGA AGAAGAGGCG
CAGGAAGAAC AGGGTGGTAT GCCGCCCCAG ATGATGGTCC AGGCGGGTGA GCCTGCCGCG
CCGCCGGCCG ATGATGACGA CGAGGATCGG GACGGTGGTG GTATGCCTCC GCAAATGGCC
CAGGCCGGTG AACCGGCTGC TCCGCCCGCG GATGACGACG AAGACGAGGG CAACGGCGGT
ATGCCTCCGC AGATGACTCA GGCTGGTGAG CCTGCTGCCC CGCCCGCGGA CGATGATGAT
GAAGACCGCG AAGGCGGTAT GCCGCAGATG GCCCAGGCGG GCGGCGCTGA AGCCCCGGCT
GGCGATGATG ACGACGACGA AGACGACGCC CCGGATTGGT AA
 
Protein sequence
MSTFRKSALA IAMSSLFALG GLSAAQAMGE GAEAPDEEEA QEEQGGMPPQ MMVQAGEPAA 
PPADDDDEDR DGGGMPPQMA QAGEPAAPPA DDDEDEGNGG MPPQMTQAGE PAAPPADDDD
EDREGGMPQM AQAGGAEAPA GDDDDDEDDA PDW