| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0530 |
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| Symbol | |
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| ID | 8806270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 555393 |
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| End bp | 558278 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_003459781 |
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| Protein GI | 289207715 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.639569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.653911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTC CATTGATCGC AGCGCTGTAC CTGCTCGCCG GGCTGTGTCT GTACGCCTCG
GCCAGCCACC TCCTGCATGC CAGCCACAGC GTACGCCGTG TGGAGCATCT GTTGTTCGCT
GCAATGTGCC TGCTGTTGGC GGGCTCCGCG ATCAGCATTG CCCTGTCCTA CCAGGCGACC
TCGATCGAGG CCTATACCGG CCCGATGAAG GCGTATTACG GCCTGATCGC GGCCCTGTAC
GTCCTGTTCG CGGCCTTTAT AGCCCGTTAC ACGGAGACCC CCGCTCGGGT CCTGCTCTCG
GTACTGGGGA TATTGATGGT CGTGGTCTGG GTCGCCAATG CGCGCCAGCC CCATGGCCTG
CAGTGGACCG AGATCGCGGA GCTGGGAAGC GTGGCACTCC CCTGGGGCGA GACGGTCACG
CGCGCCGTGG GGTCCCCGAG CCCCTGGTTC CTGCTGGGCC TGGCCGGACT GCTCCTGGTG
TTCGGGTTCT CCCTGTGGGC GTTGGTGAGC CACTGGCGCC GCGAGGGTGG ACACCTCCCG
CTGATCCTGA TCGGCGCGCT CCTCCTGTTC CTGCTGGCGA CCATCCAGGG CGTTCTGGTC
CGCCTCGGGA TCATCGATTC CATACCGCTC TCGGTCTTCG GCTATCTCGG CATGATTCTG
GTGATGAGCC TGGTCCTGCA CCGGGAGACT CAGGAACGGG TGCGCGAGTC GGAACACCGC
TTCCGCGATC TGGTTCACCA GGCCCCGATG GCGATCGAGG TACTGACCCC GGACGGCGGG
GTACGCCAGG TCAACACCGC CTGGGAAACC ATGCACGGCC ACGCAGGTGT CAAGGGCATG
AATGTCCTCC ACCACCCCGA TCCCATCGAT GGCCATGTGA CCGAGGACAT TCGCGCAGCC
GCCAGGGGTG CCCGGCGTTC CATCGCGCCA TTTGCGTGCC ATGCGGTTGC CGATCCCGCG
AAGGCGCCTG CGGGAAGTCG CTGGGTCAAG GGATACGTCT ATCCTCTCAA GAATCACCGG
GGCGAGGTGC GGGACATCAT CGTCATGCAG GAAGACATCA CACTCGCGCG GCGCGGCGAA
GATGCCTTGC GGGTAATCGC CCAGGGATTC CGCGCCGACA ACCGCCAAAG TTTCTTCCAG
AACCTGGTAT TGCGGCTGCG CGAGGTCTTT CGTGCCGACT ACGCGCTGGC GGGCATCAAC
GTCCCGGACC TGCCCGGTCA CGTCGAGACC GCCGCCCTTT GCCGCGACGG CGAACTGGTG
GGCAACATCC GCTATGCCCT GGCCAGCACC CCCTGCGACG AGGTGCTCTC GCAGGGCTTG
TGCGTGTATC CGGACCGCGT GCAGGAGCTG TTTCCGCGCG ACGAAATGCT CGTCGAAATG
GGTGCGCGCA GCTATCTGGG CGCCCCGATG ATTGACAGCC AGGGGCGCGA GCTGGGGCAT
ATCGCCATCG TCAACCGCTA CCCGCTGGAC GAGACCGAAC AGGCGGCCGG CATCCTCGAG
ATCTTTGCCG ACCGTGCCGC CGCCGAACTC GAGCGGCTGG AAGGTGAAGA ACATATCCGC
CGACTCGCCT ACCACGATCC GCTGACCGGC CTGGCCAACC GCACCCAACT GCATGACGCA
CTGACACAGG ACCTCGATCT GGCCCACCAC GGAGGCCAGC ACGGCGGGCT GATCCTGATC
GACCTGGATC ATTTCAAGAC CATCAACGAT GCCCTTGGAC ATGCGGTCGG CGACACTGTG
CTGGCGGCGG TGGCCGACCG CCTGCGCCAG CACGCACCCG AGCAAGCACT GGTGGTGCGC
CTGGGCGGGG ACGAATTCGC CACCCTGATC CATCCCCGGC GCGCATCGCG TCAGGCGATC
GAGGCGACGG TCAACGACGC GGCCCACCGG CTGCTGGATG CCTTGCAGCA CCCGATCGTA
CTGGGGGAGC GCACCTTCAG TGTTGGCGCC AGTCTGGGCT GCGTGCTGTT CCCGGACGCG
GGTCAGACCT CGTCGGATGC CCTGCGCCAT GCCGACATCG CCCTGTATCA GGCGAAACGG
GCCGGACGCG GCGGGGTGCA GTTCTACCGC CATGCGCTGC AGGACGAGGC ACGCGCCCGG
TTGCAGATCG AGGAGGGGCT GCGCCAGGCC CTGGTGAATC GCGAGATGCG CCTGAGTTAC
CAGCCGCAAT TCGATGCCCA GGAGAACATG ATCGGTGCCG AAGCGCTACT GCGCTGGACA
CACCCCGAGC TGGGCCCGGT CGGGCCGGCG CTGTTCATCC CGATCGCCGA GGAAACCGGG
CTCATCCACC CCATCGGCAC CTGGGTGGTC GAGCATGTAC TGGAGAATCT GCAGGACTGG
CACGCGCGAG GTCTGCCGCT TCCGCCCCGC GTGGCCATCA ATATCTCGCC CTGGCAGCTG
GCCCGCCCTG ATTTCGTCGC ACAGCTCCGG GAACGCGTGC AGGCCGCCGG CCTGGAAGCC
GGCCAGATTA CGCTCGAAGT CACCGAGTCG GGTCTGCTGC GCGACCTGTC CGACGCCATT
GGCAAGCTGC GGGCCCTGCG CGAGTTCGGC GTCCAGGTGG CGCTGGACGA TTTCGGCACG
GGATATTCGT CGCTGGCCTA CCTGCGCGAT CTGCCACTGG ACGAACTCAA GATCGACAAG
TCGTTCATTG ATGAACTCGT GGACAAGGGC GAGCAGATGC TCATCGAGAA CATCCTCGAT
ATCGGCCACA ACATGGGCCT GCGCGTCGTC GCCGAGGGTG TGGCCAAGCC GGCCCAGCGC
CAGCAGCTCC TGGCACTGGG TTGCACGCAT TTCCAGGGGT TTCTCTACGG CCAGCCGATC
GCGGAAGACG AGTTCCCGGC CTGGCTGGAA CGAAACGCCA CCCCGGCAGT GCAACGCCAG
AGCTGA
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| Protein sequence | MSGPLIAALY LLAGLCLYAS ASHLLHASHS VRRVEHLLFA AMCLLLAGSA ISIALSYQAT
SIEAYTGPMK AYYGLIAALY VLFAAFIARY TETPARVLLS VLGILMVVVW VANARQPHGL
QWTEIAELGS VALPWGETVT RAVGSPSPWF LLGLAGLLLV FGFSLWALVS HWRREGGHLP
LILIGALLLF LLATIQGVLV RLGIIDSIPL SVFGYLGMIL VMSLVLHRET QERVRESEHR
FRDLVHQAPM AIEVLTPDGG VRQVNTAWET MHGHAGVKGM NVLHHPDPID GHVTEDIRAA
ARGARRSIAP FACHAVADPA KAPAGSRWVK GYVYPLKNHR GEVRDIIVMQ EDITLARRGE
DALRVIAQGF RADNRQSFFQ NLVLRLREVF RADYALAGIN VPDLPGHVET AALCRDGELV
GNIRYALAST PCDEVLSQGL CVYPDRVQEL FPRDEMLVEM GARSYLGAPM IDSQGRELGH
IAIVNRYPLD ETEQAAGILE IFADRAAAEL ERLEGEEHIR RLAYHDPLTG LANRTQLHDA
LTQDLDLAHH GGQHGGLILI DLDHFKTIND ALGHAVGDTV LAAVADRLRQ HAPEQALVVR
LGGDEFATLI HPRRASRQAI EATVNDAAHR LLDALQHPIV LGERTFSVGA SLGCVLFPDA
GQTSSDALRH ADIALYQAKR AGRGGVQFYR HALQDEARAR LQIEEGLRQA LVNREMRLSY
QPQFDAQENM IGAEALLRWT HPELGPVGPA LFIPIAEETG LIHPIGTWVV EHVLENLQDW
HARGLPLPPR VAINISPWQL ARPDFVAQLR ERVQAAGLEA GQITLEVTES GLLRDLSDAI
GKLRALREFG VQVALDDFGT GYSSLAYLRD LPLDELKIDK SFIDELVDKG EQMLIENILD
IGHNMGLRVV AEGVAKPAQR QQLLALGCTH FQGFLYGQPI AEDEFPAWLE RNATPAVQRQ
S
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