| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0503 |
|---|
| Symbol | |
|---|
| ID | 8806243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 524368 |
|---|
| End bp | 526080 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_003459754 |
|---|
| Protein GI | 289207688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCT CGCAATTCCC GCTGAACACC CTGAAGGAAA CCCCGGCCGA CGCCGAGATC
GTCTCCCACC AGCTGATGCT GCGCGCCGGC TATGTCCGGC GCCTGGCCGC CGGGCTGTAC
ACCTGGCTTC CACTGGGGCT GCGCGTACTG CGCCGGGTGG AGAACATTGT GCGCGAGGAG
ATGAACCGGG CCGGTGCGCT GGAGGTACTG ATGCCGGCCG TGCAGCCGGC CGAGCTGTGG
CAGGAATCCG GTCGCTGGGA CTTCTACGGA GCCGAGCTGC TGCGCCTGAA GGATCGCCAC
GAACGCGACT TCTGCTTCGG CCCGACTCAC GAGGAGGTCA TCACCGATCT CGTGCGCCGC
GAGATCCGCA GCTATCGCCA GCTACCGGTG AACTACTACC AGATCCAGAC CAAGTTCCGG
GACGAGCGCC GCCCGCGTTT CGGCATCATG CGCGCCCGCG AATTCCTGAT GAAGGACGCC
TACTCCTTCC ACCTCGACGC CGATTCGCTG AGCCGGACCT ACCAGCAGAT GCACGATGCC
TACTGCCGTA TCTTCGAGCG CTGCGGCCTC GATTTCCGCG CGGTGGAGGC CGACACCGGC
GCGATCGGCG GCAATGCCTC GCACGAGTTC CACGTCCTCG CCAGTTCCGG CGAAGACGCC
ATCGCCTTCT CCCCGGGTGG CTATGCGGCC AACGTCGAGC TGGCCATGTG CCCGCAGCCG
GCGCAGGCCC CGCCACCCAG CGGTGAAATG GAAAAGATCG CTACCCCCGG GGTGCATACG
ATCGAGGACC TGGCGAACTT CCTCGACATC CCGACCGCGC AGACCGTCAA GACCCTGGTG
GTCGCCGCCT CCGAGGCGGT CGATGCCGAC CTGGTCGCCC TCATCCTGCG CGGTGACCAT
GAACTCAATG CCGTGAAGGC GGAAAAGCAT CCGTGGATCG CCGAGCCGCT GCGCATGGCC
GAGGCGGCCG AAATCCGGGC GGCCTTCGGT GCCGATCCCG GTTCGCTGGG GCCGGTCGGC
AGCCCGATCC CGGTCCTGGC CGACCATTCG GTGCTCGGCA TGTCCGACAT GGTGGTCGGG
GCCAACGAGA ACGGCCATCA CCTGAAACAG GTGAACTGGG AGCGTGATCT GCCGCGGCCG
GAGAGCAGCG ACCTGCGCAA CATCACCGAG GGCGAACCCG CCCCGGACGG CTCCGGCCCG
ATCGAGATTC GCCGCGGCAT CGAGGTCGGC CACATCTTCC AGCTCGGCGA CAAGTACAGC
CAGGCACTGG GCGCCCGCGT ACTGGACGAG GACGGCCGCG AACAGGTGGT GACCATGGGC
TGCTACGGTA TCGGCGTCTC GCGCGTGGTG GCCGCCGCGA TCGAACAGAA CTCCGACGAG
CGCGGCATCT GCTGGCCCAC CGCCATTGCG CCCTTCGACA TCGCCCTGTG CCCGATCGGC
GCGAAGAAGT CCCAGCGCGT GCGCGAGGCC GCGGAAAAAC TGCACGACGA ACTCGAGGCC
GCCGGCTTCC AGGTCCTGCT GGACGATCGC GAACAGCGCC CCGGGGTGAT GTTCGCCGAC
ATGGAGCTGA TCGGCATCCC GCACCGCCTG GTCATCGGCG AGCGCGGTCT GGACGCCGGC
GAACTCGAGT ACCAGGCGCG CACCGCCAGC GAGGCCGAAC ACCTGCCGAT GGACGGCCTG
CTCGACGCCC TGCGCGAACG TCTGCAGGGC TGA
|
|---|
| Protein sequence | MRVSQFPLNT LKETPADAEI VSHQLMLRAG YVRRLAAGLY TWLPLGLRVL RRVENIVREE
MNRAGALEVL MPAVQPAELW QESGRWDFYG AELLRLKDRH ERDFCFGPTH EEVITDLVRR
EIRSYRQLPV NYYQIQTKFR DERRPRFGIM RAREFLMKDA YSFHLDADSL SRTYQQMHDA
YCRIFERCGL DFRAVEADTG AIGGNASHEF HVLASSGEDA IAFSPGGYAA NVELAMCPQP
AQAPPPSGEM EKIATPGVHT IEDLANFLDI PTAQTVKTLV VAASEAVDAD LVALILRGDH
ELNAVKAEKH PWIAEPLRMA EAAEIRAAFG ADPGSLGPVG SPIPVLADHS VLGMSDMVVG
ANENGHHLKQ VNWERDLPRP ESSDLRNITE GEPAPDGSGP IEIRRGIEVG HIFQLGDKYS
QALGARVLDE DGREQVVTMG CYGIGVSRVV AAAIEQNSDE RGICWPTAIA PFDIALCPIG
AKKSQRVREA AEKLHDELEA AGFQVLLDDR EQRPGVMFAD MELIGIPHRL VIGERGLDAG
ELEYQARTAS EAEHLPMDGL LDALRERLQG
|
|---|
| |