Gene TK90_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0493 
Symbol 
ID8806233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp512858 
End bp514225 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content67% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003459744 
Protein GI289207678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0342023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCCAAA GCTCGATTCC GGATATGCGC CGCCGCCAGG TGCTGCGCGC CCTGACTGCC 
CTGGGGCTGG TCGGGCTGCC GCTGCCCGCG CTCGCGCGCA CGGGTGTCGA GCGGGTGCGC
ATGTCCGTGG ATGGCGACAC CACGCGCCTG GTCTTCGACA TGGACGGCGA TGTCGAATAC
TCGATGTTCA AGCTCGAGTC GCCCGATCGT CTGGTGGTGG ATATCAAGAA CGCCCGCGCG
GTGGACGAGC TGAAGCTCAG TTCCAACCCG CGTTCGGTCG TCGAGTCGAT CCGCCACGCC
CCGCGCGACG GCGGCGATCT GCGCGTGGTG TTCGACCTGC GCAAGCCGAT CGAGCCGCGC
AGCTTCAAGC TGATGCCGGC CCAGGATTCG CCGCATCGTC TGGTGCTCGA TCTGACCAGC
CGTGAGGGTG CCCCCACGCA GTCGGCCCGG GAGGAATCCC GCGACAACGG CGAACCTCGC
CGTGGCCGCT CGCAGGAGGA TCTGCGTGAT GTGGTGGTTG CCATCGACGC CGGTCATGGC
GGGCATGACC CGGGCGCGAT CGGCCCCGCC GGGACCCGCG AGAAGGACGT GGTCCTGCAA
ATATCCAAGC GGCTGGCCGA GCGTGTCGAC AACGAGCGCG GCATGAAGGC GGTGATGATT
CGTACCGGCG ATTACTTCCT GCCCCTGCGC GAGCGTATCG AGCGTGCGCG CGAGGCGGAC
GCCGACGTGT TTGTGTCGAT TCACGCCGAC GCCATCGCCA ACCGCAACGT GCAGGGTTCC
TCGGTATATA TGCTCTCCGA ACGCGGGGCC TCCAGCGAGG CCGCCCGCTT CCTGGCGCAG
CGCGAGAACC AGGCCGACCT GCGGCTGGGC GGTGTGCCGA TCAACGGCAA GGATGACTCC
CTGACCAACG TGCTGCTGGA TCTGGCTCAG AGCGGCAGTC TCGAGGCGAG CAACACCCTG
GCCGAGCGCA TGATTTCCGA GCTGCACCGG GTGGGCAAGG TGCGCAAGCC GGAGGTCGAG
CGGGCCAACT TCGCGGTGCT GCGCTCGCCC GATGTCCCGT CCATCCTGGT CGAGGCCGCG
TTCATCTCCA ACCCGTCCGA GGAACGCAAG CTGCGCAGCA GCGACTTCCA GAACTCGCTG
GCGGATGCGC TGCTGACCGG GCTGAGGTCC TATTTTTCGA CGCATGCCCG CCCGGGCACG
CTGATCGCCG ATGGCCAGCC GGACCAGCAC ATCATTCGCC CCGGCGAGAC CCTGTCGGGG
ATTGCCGACC GCTATAGCCT GTCGCTGGCC GACCTGCGTT CGGCGAATAA CGTCAGTGAC
GATCGCATCT ACGCCGGCCA GGTCCTGCGC ATCCCGCGCG ATTCCTGA
 
Protein sequence
MGQSSIPDMR RRQVLRALTA LGLVGLPLPA LARTGVERVR MSVDGDTTRL VFDMDGDVEY 
SMFKLESPDR LVVDIKNARA VDELKLSSNP RSVVESIRHA PRDGGDLRVV FDLRKPIEPR
SFKLMPAQDS PHRLVLDLTS REGAPTQSAR EESRDNGEPR RGRSQEDLRD VVVAIDAGHG
GHDPGAIGPA GTREKDVVLQ ISKRLAERVD NERGMKAVMI RTGDYFLPLR ERIERAREAD
ADVFVSIHAD AIANRNVQGS SVYMLSERGA SSEAARFLAQ RENQADLRLG GVPINGKDDS
LTNVLLDLAQ SGSLEASNTL AERMISELHR VGKVRKPEVE RANFAVLRSP DVPSILVEAA
FISNPSEERK LRSSDFQNSL ADALLTGLRS YFSTHARPGT LIADGQPDQH IIRPGETLSG
IADRYSLSLA DLRSANNVSD DRIYAGQVLR IPRDS