| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0489 |
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| Symbol | |
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| ID | 8806229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 506976 |
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| End bp | 509429 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003459740 |
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| Protein GI | 289207674 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC ACCCGGACAG CACCCGCTTT CAGCGCCTGT TTGAACAGGC ACCGGAGGCG
CAGCTGGTGC TCAATCGAGC GGGCCATGTC GTCGCGGCAA ACCAGGCCGC ATCACGCCTG
CTCGGCTACG CCCAGGACGA ACTGACCGGC GGCATCCACA TCACCACGAT CGACCTCGAG
GCCACGCAAG CCGACGTCGA CCGTGCGCAC GGCCAGCCCG ACGAGCGCCT GCCGGCCCGC
TTTGAAACGC GCTACCGCCG CCGCGACGGG GCGGAATTCC CGGCCGAGAT CAATATCAAC
GCGATTCACA CCGGGGAGGA TATCGAGGTC CTGGCCACGG TCCGCGACAT CACCCGGCAA
CAGCAGTCCG AGCAGGCCCT GCACGAACTG GAAACCCAGC TCTCGGCCAC GATCCGTCAC
GCGCCGCTGC TCCTGTTCGG GCTGGGGCCC GATGGCGTTT TCACCCTGTC CGAGGGGGCT
GCCCTGCACA GCCTGGGACT GCAACCCGGC GAGGTCGTCG GACAGGACGC ACGCCTGTTG
TACGCCGACC ATCCGGCCAT CCTGTCCGCG ATCGACCGCG CGCTCGAGGG AGAACAATTC
CAAAGCGAGG TCAAGGTCGG CGACAGCCAC TTCGCCATCT CCTGGATGCC GATGGAGGTC
GCCCAGTCAT TTCAGCCAGG CGTGCTCGGT GTCGCCTGGG ACATCACATC GCTGCGCGCG
GCCGAGGCCA GCACCGCCTC GGAACGCGAC CGGCTCCTGA CCACGCTGCA CTCCATCAGC
GACGGCGTGC TGACCGCGGA CACCACCGGG CGCCTGACCT ATCTCAACCC GTCGGCGCGC
GACCTGCTGG GCGTGGACGC CACGGCGGTC CAGGGCCAGC GCCTCGACGA GTTGCTGGAG
CTCGAGGACA CGCATACCGG CCACCGGGTT ATGAATCCGG TCACGCAGTG CCTGGAAACG
GGCATGACGC TGGAGTCGCC GGAGCGCGTG CTGCGCCGTC CGGACGGGGC CGCACGCGTG
GTCCGTCTGC TGGTCTCGCC TCTGCGGCGA CCGGACCACC ACAGCGAGGG GGTCGTGGTC
GTGCTGCACG ACCACACCGA GCTGTGGCGC ATGACCCAGC AACTGAACCA CCAGGCTACC
CACGACGAGC TCACCGGCCT GTGCAACCGC CGCGAGTTCG AACGCCGCCT GGACGAGGCC
CTGCGCACCC TGGAGGAGGG CGACACACCC CACGCGCTGT TCTACATGGA CCTGGACCAG
TTCAAGATCA TCAACGACAC CTGCGGCCAC CAGGCCGGGG ACGCGCTGCT GCGCGAACTG
GCCGATCTGC TGCCCGCCCA TATCCGCGAC AGCGACACCC TTGCGCGGCT CGGCGGCGAC
GAATTCGGGC TGCTGCTGAG GCACTGTCCA GTGGAACGCG CGGAGGCGAT TGGCAACAAG
CTGCTGGCCA CGGCCCAGGG CCTGCGCTTC TCCTGGGAGG GCCGCCGCTT CGATGTCGGC
ATGAGCATCG GCCTGGTCCC GATCGAGGGC CCCGGCCAGA ATCTTCCGGA GGTCCTCAGC
CAGGCGGATT CCGCCTGCTA CGTGGCCAAG GATCTCGGGC GCAACCGCCT CTATACCTGG
AAGCCCTCCG ACCAGATCCT GCGCCGGCGC CATGGCGAGA TGGAATGGGT CGGCCGTCTG
CGTGCGGCGC TGGAGGAGGC CCGGTTTGTC GCCTATGCCC AGCCAGTCAA GCCCCTGAAC
GGCGCCGATC TGCCACTGGA CCATGTCGAG ATCCTGCTGC GTCTGCACGG GGAAGACGGA
ACCCTGATCA CCCCGGGTGC CTTCATCCCG GCCGCCGAGC GCTACCACCT GATGCCCGAG
ATCGATCGCC ATGTGGTCGA ACTCGTGTTT CGCCAGCTGG CCGATCACCG GGACCGGAAC
CCGCATCATG CCCCAGTCGT GGTGTCGATC AACCTGTCCG GACAATCGCT GGCGCAGGAC
GGGATGCTCG AGTTCATCAC CAGCCGCATG AGCCAGTTCC GCATTCAGGC GCAGCAGATC
ATCTTCGAGG TTACCGAGAC CGCCGCGATC AGCCATCACG ACCGCGCGCA GGGGCTGATC
CGGGCGCTGC GCTACATGGG TTGCCGCTTC TCCCTGGACG ACTTCGGCAG CGGGCTGTCC
TCGTTCGGCT ACTTGAAGAA CCTGCCGGTC GACTTCCTCA AGGTGGACGG CAGCTTCGTG
CGCGACATCG CAACCAACGC CGTCGACGCG GCGATGGTCA CCGCAATCCA CCGCGTCGGC
CATGTGCTCG GGCTGCGCAC CATCGCCGAG TGCGTGGAAT CCGAGGAGAC GATGCACCAC
CTGCGCGAGA TCGGACTCGA CTTTGTCCAG GGCTACCACC TGGCAAAGCC GATCCCTTTG
ACCGATCACC TCGCAGCGCT TGCCAGCCAG GGAAACACCG ATAACCAGGC TTGA
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| Protein sequence | MPDHPDSTRF QRLFEQAPEA QLVLNRAGHV VAANQAASRL LGYAQDELTG GIHITTIDLE
ATQADVDRAH GQPDERLPAR FETRYRRRDG AEFPAEININ AIHTGEDIEV LATVRDITRQ
QQSEQALHEL ETQLSATIRH APLLLFGLGP DGVFTLSEGA ALHSLGLQPG EVVGQDARLL
YADHPAILSA IDRALEGEQF QSEVKVGDSH FAISWMPMEV AQSFQPGVLG VAWDITSLRA
AEASTASERD RLLTTLHSIS DGVLTADTTG RLTYLNPSAR DLLGVDATAV QGQRLDELLE
LEDTHTGHRV MNPVTQCLET GMTLESPERV LRRPDGAARV VRLLVSPLRR PDHHSEGVVV
VLHDHTELWR MTQQLNHQAT HDELTGLCNR REFERRLDEA LRTLEEGDTP HALFYMDLDQ
FKIINDTCGH QAGDALLREL ADLLPAHIRD SDTLARLGGD EFGLLLRHCP VERAEAIGNK
LLATAQGLRF SWEGRRFDVG MSIGLVPIEG PGQNLPEVLS QADSACYVAK DLGRNRLYTW
KPSDQILRRR HGEMEWVGRL RAALEEARFV AYAQPVKPLN GADLPLDHVE ILLRLHGEDG
TLITPGAFIP AAERYHLMPE IDRHVVELVF RQLADHRDRN PHHAPVVVSI NLSGQSLAQD
GMLEFITSRM SQFRIQAQQI IFEVTETAAI SHHDRAQGLI RALRYMGCRF SLDDFGSGLS
SFGYLKNLPV DFLKVDGSFV RDIATNAVDA AMVTAIHRVG HVLGLRTIAE CVESEETMHH
LREIGLDFVQ GYHLAKPIPL TDHLAALASQ GNTDNQA
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