Gene TK90_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0439 
Symbol 
ID8806179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp459680 
End bp460078 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003459690 
Protein GI289207624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.29268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACA CTAGCCGCCC GCGCCGACGC AATCTGATCA GCCTCACTCC GCTGATCGAT 
GTCGTCTTCA TCCTGCTCGT GTTCTTCATG CTCGCCTCGA GCTTCCTTGA GTGGCGCGCG
GTGCAACTCG AGGCGCCGGC CGAGGCCGGT GGGGCCGGCT CGATGGAAGG CGCCATGCTG
GTCGAGATCC GGTCGGACGG GCTGCGGCTG GCGGGAGAGA TGCTGTCGGA GGGCGACCTG
CACGACCGTA TCAGCGCGCG CGTGCGCGAA GAAGCGGACA CGCGGGTCCT GGTGATGCCG
GCCCCGGGGG TCAGCATGCA GGACACCGTC AACGTGCTGG AGGGACTCGC AGATGTTGGG
GCGCGCAATC TTTCGGTAAT CCGGCAGGCA CAGCCATGA
 
Protein sequence
MLDTSRPRRR NLISLTPLID VVFILLVFFM LASSFLEWRA VQLEAPAEAG GAGSMEGAML 
VEIRSDGLRL AGEMLSEGDL HDRISARVRE EADTRVLVMP APGVSMQDTV NVLEGLADVG
ARNLSVIRQA QP