| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0415 |
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| Symbol | |
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| ID | 8806155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 436600 |
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| End bp | 438501 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003459666 |
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| Protein GI | 289207600 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA CGCCCCTGCT GGATGCAATC GAATGGCCCG CCGACCTGCG GGCACACCCG
GCCTCGGAAC TGCCCGGCCT GGCCGGCGAG CTGCGCCAGT TCCTGATCGA GAGCGTCTCG
CGCACGGGCG GGCACCTGGC CGCCAACCTG GGCACGGTGG AGCTCGCGAT CGCGCTGCAC
TACGCGTTCA ACACCCCGGA TGATCGCATT GTGTGGGATG TCGGCCACCA GGCCTACGCG
CACAAGATCC TGACCGGGCG GCGGGCCGGC ATGGCCAGTC TGCGCCAGTA CGGCGGACTG
GCCGGGTTCC CCAAGCGTGC GGAGAGCGAA TACGACGCCT TCGGGGCCGG GCATTCCAGC
ACCTCGATCA GCGCGGCCGC CGGGATGGCC CTGGCGGCCA AGCACGCCGG ACTGGACCGC
CGCCATGTCG CGGTGATCGG CGACGGGGCG ATGACCGCCG GCATGGCCTT CGAGGCGCTC
AACCATATCG GCGATCTTGA CTGCAATCTG CTGGTCATCC TGAACGACAA CGACATGTCG
ATCTCGCCCA ACGTCGGCGC GATGAACCAG TACTTCACTC GCCTGCTGTC CGGACGCATC
TACAGCTCGG TGCGCGAGGG CTCCAAGCGC ATGCTGGAGT TCGTCCCGCC GGTGAAGGCC
TTCGCCGAGC GCGCCGAGGA ACACATGAAG GGCATGCTGG TACCTGGCAC GCTGTTCGAG
GAGCTGGGTT TTCGCTATTT CGGCCCCGTG GACGGGCACG ACGTAAACGG CCTGGTATCG
ATCCTGAAGA ACCTGCGCGG CGGCCACGGC CCACAGCTGC TGCATGTGGT TACGCGCAAG
GGACAGGGCT ACGCCCCGGC CGAGGAAGAT CCCTGCCGCT ACCACGGGGT CTCCAAGTTC
GAGCCGGAAA ACGGCCTGAA GCCCTCGGGC CCGAAGGCAC CGACCTATAC CGACATCTTC
AGCCAGTGGC TTTGCGATCA GGCCGCGGCC GACGAGCGCC TGCTGGGCAT TACCCCGGCG
ATGCGCGAGG GTTCCGGCCT GGTCGCCTTC TCCGAGCAGT TCCCCGAGCG CTACTTCGAT
GTCGGAATCG CCGAGCAGCA CGCGGTCACG CTAGCCGCCG GCATGGCCTG CGAGGGACAG
AAGCCCGTGG TCGCGATCTA CTCGACCTTC CTGCAGCGGG CGATGGACCA GGTGATCCAC
GACGTCGCCC TGCAAAAACT CCCGGTACTG TTCGCGGTCG ACCGCGCGGG GATCGTTGGC
GCTGATGGCC CGACCCATGC CGGCACCTTC GATACCGCGC TGCTGCGCAG TGTCCCCAAC
ATGCTGCTGA TGGCCCCGGC CAGCGAGCGC GAGTGCCGCC AGATGCTGTC CACTGGCTAC
GCCTACGAGG GCCCGGCGGC GGTGCGCTAT CCGCGCGGGG GCGGCCCCGG CGTCCTGCCG
GAAGGGGGCA GCGAGGATTT GGAGACCCTG CCGATCGGAC GCGCCGAGGT CGTACGCGAG
GGCCGGGGTC TGGCGATCCT CAGCTTCGGC GCGCTGCTGG AGACCGCCCT GGCCGCCGGC
GAAGCGCTGG ATGCGACCGT GGTGAGCATG CGCTTTATCA AGCCACTCGA CACCGAACTG
CTGGCGCGGC TGGCCTCCAG CCACGAACGC TTCGTGGCGC TCGAGGATCA TGCCCGAGCC
GGTGGCGCCG GCAGCGCGGT GCTGGAATGG CTGTCCGCCG AGGGCCTGAC CCTGCCCTGT
CAGGTACTGG GCATCCCGGA CGTCTTCACC GAACACGGCT CGCGCGAACA GATCCTGGCC
GACTGCGGCC TCGACACCGA GGGCGTGCTG GCCGCGATTC GCCACGCATC CGGGCAGGAG
AATTGCGCCG AAGACAACGG CCGGCTAGGC TTCGCGGGCT GA
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| Protein sequence | MTPTPLLDAI EWPADLRAHP ASELPGLAGE LRQFLIESVS RTGGHLAANL GTVELAIALH
YAFNTPDDRI VWDVGHQAYA HKILTGRRAG MASLRQYGGL AGFPKRAESE YDAFGAGHSS
TSISAAAGMA LAAKHAGLDR RHVAVIGDGA MTAGMAFEAL NHIGDLDCNL LVILNDNDMS
ISPNVGAMNQ YFTRLLSGRI YSSVREGSKR MLEFVPPVKA FAERAEEHMK GMLVPGTLFE
ELGFRYFGPV DGHDVNGLVS ILKNLRGGHG PQLLHVVTRK GQGYAPAEED PCRYHGVSKF
EPENGLKPSG PKAPTYTDIF SQWLCDQAAA DERLLGITPA MREGSGLVAF SEQFPERYFD
VGIAEQHAVT LAAGMACEGQ KPVVAIYSTF LQRAMDQVIH DVALQKLPVL FAVDRAGIVG
ADGPTHAGTF DTALLRSVPN MLLMAPASER ECRQMLSTGY AYEGPAAVRY PRGGGPGVLP
EGGSEDLETL PIGRAEVVRE GRGLAILSFG ALLETALAAG EALDATVVSM RFIKPLDTEL
LARLASSHER FVALEDHARA GGAGSAVLEW LSAEGLTLPC QVLGIPDVFT EHGSREQILA
DCGLDTEGVL AAIRHASGQE NCAEDNGRLG FAG
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