Gene TK90_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0386 
Symbol 
ID8806121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp403782 
End bp404615 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003459637 
Protein GI289207571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.232819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGC CGGTCGCCGA AGACAGCCCG CATATCGTCA TCGAGAACCT GCGCTTCCGG 
CGCGGGCGCA AGGTGGTCTT CGAGGACCTG TCCATGCGCA TCCCGCGCGG GCAGGTGACC
ACGGTCATGG GCCCCAGTGG CAGCGGCAAG ACGACTCTGC TGCGCCTGAT CGGTGGTCAG
CTGCGCCCGG ACGGCGGCCG TATCTGGGTC GACGGCCAGG AGGTCGCACG GCTCTCGACC
CGACGCCTGT ACGCCCTGCG CAAGCGCATG GGCATGCTGT TCCAGAGCGG GGCCCTGCTG
ACCGATCTCT CGGTGTTCGA GAATGTCGCC TTCCCGCTGC GCGAGCACAC CGAACTCCCC
GAGGACGTGC TGCGCACCCT GGTGCTGCTG AAGCTCGAGG CGGTGGGTCT GCGTTCCGCG
CGCGACCTGG ACCCGGCCTC GCTGTCCGGA GGCATGGCGC GGCGCGTGGC GCTGGCGCGC
GCGATCGCGC TGGATCCGGA CCTGATCATG TACGACGAAC CCTTTACCGG CCTGGACCCG
ATCACCATGG GCCAGATCGT GACCCTGATC CGGCGCACCA ACCAGAGCCT GGGCCTGACC
AGCGTACTGG TATCGCACGA CGTGACCGAG GCCATGGCCA TCTCCGATCA CGTAGTACTG
ATTGCCGATG GCCGGGCGGT GGATGCCGGG GCACCGGACG ACCTGCGTGC CCGCGCCTCC
GACTGGAGCG CCCAGTTCCT TGAGGGCCGC CCCGATGGCC CGGTGCCGTT TCATTATCCC
GGCGACAGCT ACCGCGAGGA TCTGCTCGGG GTGCGGGAGC GACGCGATGA TTGA
 
Protein sequence
MAEPVAEDSP HIVIENLRFR RGRKVVFEDL SMRIPRGQVT TVMGPSGSGK TTLLRLIGGQ 
LRPDGGRIWV DGQEVARLST RRLYALRKRM GMLFQSGALL TDLSVFENVA FPLREHTELP
EDVLRTLVLL KLEAVGLRSA RDLDPASLSG GMARRVALAR AIALDPDLIM YDEPFTGLDP
ITMGQIVTLI RRTNQSLGLT SVLVSHDVTE AMAISDHVVL IADGRAVDAG APDDLRARAS
DWSAQFLEGR PDGPVPFHYP GDSYREDLLG VRERRDD