| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0375 |
|---|
| Symbol | |
|---|
| ID | 8806110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 395253 |
|---|
| End bp | 395678 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | PTS system fructose subfamily IIA component |
|---|
| Protein accession | YP_003459626 |
|---|
| Protein GI | 289207560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.315145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTG GTCTGATCTT GATCACGCAT CAAAACCTCG GCGACACCCT GCTGCAAACG
GCCCGCAGCA TGCTGGGCGA CCTGCCCGAG GATTGCGAGT CCATGGCGAT GTCGCAGAAT
GACGACCCCG ACGAGGTGCT GGCGCGGGCG CGGGCGCGCC TCGGAGAGCT GGATTCCGGC
TCCGGTGTGC TCATTCTGAC CGACATGTTC GGTTCTACCC CCTCTAATGT GGCCAGCCGC
GTGGCGCGGG GGGCGAACGC TCGCGTCATC GCCGGGATCA ACCTGCCGAT GCTGATCCGT
GTGCTGAACT ACCGCCATCT GCCACTGACG GAACTGGTCA ACAAGGCCCT GTCCGGCGGG
CACGATGGCA TCCTTCTTTG TGACCAGGAG TGTTCGGATG CCGCAGCGCG AAGTCCCCAT
CGTTAA
|
|---|
| Protein sequence | MGVGLILITH QNLGDTLLQT ARSMLGDLPE DCESMAMSQN DDPDEVLARA RARLGELDSG
SGVLILTDMF GSTPSNVASR VARGANARVI AGINLPMLIR VLNYRHLPLT ELVNKALSGG
HDGILLCDQE CSDAAARSPH R
|
|---|
| |