| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0368 |
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| Symbol | |
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| ID | 8806103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 389593 |
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| End bp | 390117 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_003459619 |
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| Protein GI | 289207553 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.166234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC GTGGTGGGTC GTCGCTCGCC CGGGCCGGAT GGTCCGTGCT GCTGGGCAGT
GCCTTGTTGC TGCTGGCCGC GCCGGTCATT GCCCAGCAGC AGCCCCTGCC GGTGGAGATT
ACCGCCGATC GTGCGGAGAT GGACGACCGG CGGGGCGTAA GCACTTATAC CGGTGATGTG
GTGGTGATTC GCGGGGACAT GACACTGGAG GCCGACAAGG TCTATGTGCG CAGCCGCGAT
CGACGCCCTT ACGAGATGGA GGCCCACGGC GAGCCCGCGC GGCTGGAGTC CCCGGACCCG
GAGACGGGCG AGATGCGCAT CGCCACCGCG CTGCGCATCG ACTACCTGCT GAACGAGGAC
CGGGTGATCC TGACCGACCA GGCGCATGTG ATCACGGCAG CCGAGGAAGC GCGCGGCAAG
CGCATCGTCT ACGACCTGGA GACGGATGTG ATCGAGGCCG AGCGTGGCGA GGCCGATGAC
GAGCGTGTAC GTATCAGGAT CCAGCCCCGC GAAGACGACG AATGA
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| Protein sequence | MTERGGSSLA RAGWSVLLGS ALLLLAAPVI AQQQPLPVEI TADRAEMDDR RGVSTYTGDV
VVIRGDMTLE ADKVYVRSRD RRPYEMEAHG EPARLESPDP ETGEMRIATA LRIDYLLNED
RVILTDQAHV ITAAEEARGK RIVYDLETDV IEAERGEADD ERVRIRIQPR EDDE
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