Gene TK90_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0366 
Symbol 
ID8806101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp388501 
End bp389040 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 
Protein accessionYP_003459617 
Protein GI289207551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.239819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTC ACGACGAGGC CCTGCACAGC CGCCAGGCGG CGGTGCGTCT GCTGATCCTG 
GATGTCGACG GCGTGCTGAC CGATGGCAGC CTGTTCATGG GAGATGCCGG CGAGCAGTAC
AAGGCCTTTC ATTCGCGCGA CGGGCACGGC ATCCGTCTGG CATTGGACGG AGGGCTGGAG
GTCGCGATCC TGACCGGACG CACCTCCGGG GTGGTCGAGC ACCGCATGCG GGACCTCGGT
GTGCAGCATC TGGTGCAGGG GCGGCGCGAC AAGGGGGCCG CACTGCACGA GTTGCTGGAG
CAGAGCGGCC ATGCGCCCGA CGAGGCCGCC TTCGTGGGCG ACGACATCGT TGATCTGCCA
GCGATGCGCC GTGTGGGGCT CGGCATCGCG GTGGCGGATT CCCACCCGTT GGTATTGCAG
CATGCACATT GGGTTACGCA GGCCCCCGGC GGTCGCGGCG CGGTGCGCGA GGTCTGCGAG
GGCCTGCTGG CGGCCCAGGG GCGGCTGGAG GCCCTGTTCG CGGAGTATGT CGACGGATGA
 
Protein sequence
MDRHDEALHS RQAAVRLLIL DVDGVLTDGS LFMGDAGEQY KAFHSRDGHG IRLALDGGLE 
VAILTGRTSG VVEHRMRDLG VQHLVQGRRD KGAALHELLE QSGHAPDEAA FVGDDIVDLP
AMRRVGLGIA VADSHPLVLQ HAHWVTQAPG GRGAVREVCE GLLAAQGRLE ALFAEYVDG