Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0357 |
Symbol | |
ID | 8806092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 381081 |
End bp | 381866 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | VacJ family lipoprotein |
Protein accession | YP_003459608 |
Protein GI | 289207542 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.32783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTTT TCTCCCATTT GCGCATAGGG CTCGCGGCCC TGATGGTACT GGGGCTTGCC GGCTGTGCGA GCGTACCCAG CGAGGATCGT CATCCGGACG ACCCTTGGGA GTCGTATAAC CGGGTGGTGT TCGAGATCAA TGACGACTTT GACCAGGCCC TGTTGCGTCC GACCGCGGTA CAGTACCGGC GTCTGCCGCA GCCGGTGCAG ACCGGGGTGG GCAACTTCTT CTCCAACCTC AATGACTTCA CCGTCCTGTT CAACAATCTG TTGCAGGGCA ACCTGGAGGA TGCCGCCTCC GATACTGGGC GCATCATGTT CAATACAACC TTCGGGCTGC TCGGCCTGAT CGATGTCGCC TCGCCCATGG GGCTCGAGAA GAACAATCAG GACTTCGGTC AGACCCTGGG GGCCTGGGGT GTGGCCCGCG GGCCCTATCT GCAACTGCCG CTGCTGGGGC CCAGCACGGC TCGTGATGCT CCGGCGCGTC TGGTGGACGG CTATACCAAC CCCCTCTATC ACACCAACCT GCGCAGCGAT CACACCGGCT GGTGGGTGGG CCTGATGGCG CTGGACGTGG TGGATATGCG CGCCGGGCTG ATCCCGACCG AACGCATGCT GGCGCAGCTA TCCGACGACC GCTACATCGC GCTGCGTGAG GCCTATCTGC AACGCCGCGA CTTCCTGGTC CGCGGGGCAT CGGACGAACG TGCCACCGAG ATGCTGGACG AACTCGACGA GCTCGAAGCA CTGGAGGCGA TGGAGGCCGA GGAGGGTACG GATTGA
|
Protein sequence | MSVFSHLRIG LAALMVLGLA GCASVPSEDR HPDDPWESYN RVVFEINDDF DQALLRPTAV QYRRLPQPVQ TGVGNFFSNL NDFTVLFNNL LQGNLEDAAS DTGRIMFNTT FGLLGLIDVA SPMGLEKNNQ DFGQTLGAWG VARGPYLQLP LLGPSTARDA PARLVDGYTN PLYHTNLRSD HTGWWVGLMA LDVVDMRAGL IPTERMLAQL SDDRYIALRE AYLQRRDFLV RGASDERATE MLDELDELEA LEAMEAEEGT D
|
| |