| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0356 |
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| Symbol | |
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| ID | 8806091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 378760 |
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| End bp | 380763 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003459607 |
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| Protein GI | 289207541 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.589026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.448313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGC GTGCGTACTT CCGGCGATCG CCAGGCTGCC TGTCCTGGTT CGGCAGGGGC
GGTCTCGGGG GTGTCGTTCT GCTGTGGGGG CTGTTCTTTG GCGCGCTGCT GGCAACGCCT
GCGGGTGCGA AGGCCGAGGC GGCCGAGCGC GAGTTGATCT TCGCGGTGCT CGCGCACCGG
GGCGAGGATG CCGCGCGCGA GCAGTGGACG CCTTTCGCCG AGTACCTGGA GCAGACGCTG
GAGGGCATTC AGGTCCGCCT GTTGCCGGTC GACAACGATG CCCTGCAAGC AGGGGCGGCC
GAGGACCGCT TCGATCTGGT GCTGACCAAC CCCGGCTCCT ATGTGATGCT GGAGCAGCGT
CATGGTATCT CCCGTATCGC GACCATGCTC CCGGCCGAAG TTGGACGCGA GGAAGACCGC
TTTGGCGCCG TGATCGTCGC GCGCGAGGGC CGTGTGGACC TGGTCGAGCT CGGTGACCTG
GTCGGGCAGC GGATCTCCGC GGTCCACCCC GACGCCTTCG GCGGTTGGTG GATGGCCTGG
CGCGAACTGC AGGCGGCCGG GCTGGATGTC GAGGACGATC TGGATCGCGT GGTATTCACG
GGCTTCCCGG TCTCCCGGGG ACTGGATCTG TTGTTGGCGG GCGAGGTGGA TGCCGCGACC
TTTCGCACCG GGATCCTCGA AGATCTGCGT GAGCAGGGCG ACCCACGGGT CGAACAAGTG
CGCCTGATCG GCGAGCGGGC CGTGCCCCGC TTCCCCTACC GAACCTCCAC CCGCCTGTAC
CCGGAGTGGC CGCTGGCAAT GCGCGGCGAT CTCGATGCCG AGATCGCGCA GGCCGTGCTG
CGCGCCATTT TGGCGCTGGA TGCCGAGCAC CCGGTGAGCC AGGCGGCCGG GATTGCGGGC
TGGTCCGCGC CGCGTTCCTA CGAGGATGTG CAGGGCCTGA TGTACGACCT GGGCGTGGGG
CTTTACGCCC CCGAGCCGTT CGCCGTGCTG CGATGGGCGC GCGACAACCT GGCGGTGCTG
CTCGCTGTCC TGGCGGCAGG CATCGCGGCG ATTCTCCTGT ATGTGCTGCG AGTGCATGCC
CGCATGCGCA TCGCCGGGCA CAACTTGCGC CGGGCGATGT GTGCGATCCC GAATGCGGTG
ATCACGCTGG ACGCCCGTGG CGGGATCGTC TACATGAACC CTGCGGCCGA GCAGATGGCG
GGGCTGGTCC GCCTGCAGGC ACTGGGTTGC ACCCTGGAGC AGGTCCTGGA CCTGCGCGAG
ATGGGGACGG ATCGGCCGCT GGGTGCAGAG CGATCCGAGC CACTCGCCGC AAATCTGGGG
GAGCATACCG AGGCCCGGCT GGTGACCCCG AGCGGCCAGG AGCGGATCGT GCGTATCGAC
CGCACGGCGC TGGACCCGGT GGCGGGCAGT TCGGTGCGCA CCCTGCTGGT GCTGGCCGAT
ATCTCCGAGG AGCGCGAGCT GGTGGATCGG CTGGTGCATG AAGCGAGTCA CGATCCGCTC
ACCGGTTTGT TGAACCGGCG CGCATTCGAG CGCGAGATGC AGCGCGCGAT GGACAATGCC
CGTGAATACT CGTCGGTAGC GAGCCTGGTA CTGGTGGATC TGGATTACTT CAAGGCGGTC
AATGATCGTC ACGGGCATCA GGTTGGTGAC GAGTTGTTGC GCCGCGTGGG GACGATCCTG
CGGCAGCTGA CGCGGTCGCG CGATGCCGTG GCCCGGATCG GCGGCGACGA GTTCGCCGTC
GTGGCCTTTG ATACTGACGC CGAACAGGCC CGCATCCTCG GCCAGAGGAT CTGCAGTGCC
CTGGGGGACC GCCCGTTGCA GGTGGAGGCG CGGGACGTCA CCATTGGGGC TTCCGTGGGC
GTGGTGCAGC TGGGCGCGGG CCTGGCCGGC GTGGATGCGG CCTTCGTGGC GGCCGATCGG
GCCTGCTACA GCGCCAAGAG CGAGGGCCGC GGCCAGGTTG GCGTGGCGCG CAAGGCGGAT
ATTCACCCCA TTACCGGTTC CTGA
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| Protein sequence | MSPRAYFRRS PGCLSWFGRG GLGGVVLLWG LFFGALLATP AGAKAEAAER ELIFAVLAHR
GEDAAREQWT PFAEYLEQTL EGIQVRLLPV DNDALQAGAA EDRFDLVLTN PGSYVMLEQR
HGISRIATML PAEVGREEDR FGAVIVAREG RVDLVELGDL VGQRISAVHP DAFGGWWMAW
RELQAAGLDV EDDLDRVVFT GFPVSRGLDL LLAGEVDAAT FRTGILEDLR EQGDPRVEQV
RLIGERAVPR FPYRTSTRLY PEWPLAMRGD LDAEIAQAVL RAILALDAEH PVSQAAGIAG
WSAPRSYEDV QGLMYDLGVG LYAPEPFAVL RWARDNLAVL LAVLAAGIAA ILLYVLRVHA
RMRIAGHNLR RAMCAIPNAV ITLDARGGIV YMNPAAEQMA GLVRLQALGC TLEQVLDLRE
MGTDRPLGAE RSEPLAANLG EHTEARLVTP SGQERIVRID RTALDPVAGS SVRTLLVLAD
ISEERELVDR LVHEASHDPL TGLLNRRAFE REMQRAMDNA REYSSVASLV LVDLDYFKAV
NDRHGHQVGD ELLRRVGTIL RQLTRSRDAV ARIGGDEFAV VAFDTDAEQA RILGQRICSA
LGDRPLQVEA RDVTIGASVG VVQLGAGLAG VDAAFVAADR ACYSAKSEGR GQVGVARKAD
IHPITGS
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