| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0332 |
|---|
| Symbol | |
|---|
| ID | 8806063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 350924 |
|---|
| End bp | 352375 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, A subunit |
|---|
| Protein accession | YP_003459583 |
|---|
| Protein GI | 289207517 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.124108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGG AAACCCTGTC CGGCTGGGTG CGCAAGCTTC AGGCCCGCGA GATCAGCTCG
CGCGAGCTGA CTCAGCTGTA TCTGGAGCGG ATCGAGCGCC TCGATCCCCA GCTCAACAGC
TTTATTACCG TGACCGCCGA GTCCGCGCTG GCGCAGGCTG ATGCCGCCGA TGCACGTCTG
GCCAATGGCG AGCAGACGCC GCTGCTCGGC GTGCCGGTCG CGCAGAAAGA CATCTTCTGC
ACCGAGGGCG TGCGTACCTC CTGCGGCTCG CGCATGCTCG ATCCGTTCAT CTCGCCCTAC
AACGCTACCG TCGTCGAGCG CATGAACGCC GCCGGGGCGG TGATGCTGGG CAAGACCAAC
ATGGACGAGT TCGCGATGGG TTCGTCCAAC GAGACCAGTT TCTACGGCCC GGTGCGTAAC
CCCTGGGATA CCGAGCGTGT CCCGGGCGGC TCCTCCGGCG GTTCCGCCGC GGCGGTGGGC
GCGCGTCTGG TGCCGGGGGC GACCGGGACC GATACCGGCG GCTCGATCCG CCAGCCGGCC
GCGTTCTGCG GCATTACCGG GCTCAAGCCG ACCTACGGGC GCGTGTCGCG CTACGGCATG
ATCGCCTTTG CCTCCAGTCT CGACCAGGGT GGGCCGATGG CCGTGACCGC CGAGGACTGC
GGTCTGATGC TGAACGCCAT GGCCGGTTTC GACGAGCGCG ACTCCACCAG CGTCGAGCGC
CCGGCCGAGG ACTTCACCGC CGGTCTGAAC CAGGACCTCA CGGGTTTGCG TATCGGCCTG
CCCAAGGAGT TCTTCGGCGA GGGCCTGGAC GAGAAGGTGC GTGGCGTGAT CGACGCGGCC
GTCGAGGTGC TCAAGGGCCG CGGTGCCGAG ATCCGCGAGG TCAGCCTGCC CTACAGCCAC
CTGTCGGTGC CGGCCTACTA CGTGGTCGCC CCGGCCGAGT GTTCCTCGAA CCTCGCCCGC
TTCGACGGCG TGCGCTACGG CCACCGCTGC GACAACCCCG AGGATCTGAT GGACCTCTAT
ACCCGTTCGC GCGGGGAGGG GTTCGGCGAC GAGGTGAAGC GCCGCATCAT GGTCGGCACC
TACGTGCTGT CCGCCGGCTA CTACGACGCC TACTACCTGA AGGCACAGAA GGTCCGGCGC
ATCATCGCCG ACGACTTCCG CAGCGCCTTC GAGGACGTCG ACGTCCTGCT CGGCCCGACT
ACGCCGGAGC TGCCATTCGC GCTGGGCGCC AAGGCCGACC CGGTCAGCAT GTACCTGTCG
GACATCTACA CCATTGCCGC GAACCTCGCG GGCCTGCCAG CGATGTCGCT GCCGGCCGGC
GAGATCGACG GCCTGCCGGT GGGGCTGCAG CTGATTGGCA ACTATTTCGA CGAGGCGCGC
CTGCTCGGCG TCGCCCACCA GTACCAGCAA GAAACCGACT GGCACACCCG TGTGCCGGCG
GCCTTCGCCT GA
|
|---|
| Protein sequence | MSQETLSGWV RKLQAREISS RELTQLYLER IERLDPQLNS FITVTAESAL AQADAADARL
ANGEQTPLLG VPVAQKDIFC TEGVRTSCGS RMLDPFISPY NATVVERMNA AGAVMLGKTN
MDEFAMGSSN ETSFYGPVRN PWDTERVPGG SSGGSAAAVG ARLVPGATGT DTGGSIRQPA
AFCGITGLKP TYGRVSRYGM IAFASSLDQG GPMAVTAEDC GLMLNAMAGF DERDSTSVER
PAEDFTAGLN QDLTGLRIGL PKEFFGEGLD EKVRGVIDAA VEVLKGRGAE IREVSLPYSH
LSVPAYYVVA PAECSSNLAR FDGVRYGHRC DNPEDLMDLY TRSRGEGFGD EVKRRIMVGT
YVLSAGYYDA YYLKAQKVRR IIADDFRSAF EDVDVLLGPT TPELPFALGA KADPVSMYLS
DIYTIAANLA GLPAMSLPAG EIDGLPVGLQ LIGNYFDEAR LLGVAHQYQQ ETDWHTRVPA
AFA
|
|---|
| |