| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0328 |
|---|
| Symbol | |
|---|
| ID | 8806059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 347831 |
|---|
| End bp | 348322 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | rod shape-determining protein MreD |
|---|
| Protein accession | YP_003459579 |
|---|
| Protein GI | 289207513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0530008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG CGCTGGGCAT CCCCTGGCTG ATCGCCCTGA CCCTGGTCGT CGCGCTGGCC
CTGTCCATCG TGCCTATCCC CGATGCGCTG CCCCCGGCCC GGCCTGAATG GCTCCTGCTG
GCGCTGGTGT ACTGGATCAT GGCCTTCCCC CAGCGCTTCG GGGTGCTGAC GGCCTTTATC
ATGGGGCTGC TACTGGACGC CCTTTACGGC CAGTTACTCG GACAGAACGC CATCGCCCTG
GCGGTGGTGG CGTACATCGT GCTGCAGATT CATCCACGCC TGCGGGTTTA CCCCGTCTGG
CAACAGACCA TCGTGGTGGC CGTCCTCACA GCGCTGTACA AGCTCCTGGC CCTGTGGCCG
CAGGGCGCGA TTGGGCTGCC GCCCGGTAGC GCCTGGTACT GGGCGCCAGT GGCGACCAGC
GCACTGGTGT GGCCGTTGAT CTTCGTGCTG CTAAGGGATA TGCGTCGGCG CTGGCTGCTC
CACCTGAGCT GA
|
|---|
| Protein sequence | MNRALGIPWL IALTLVVALA LSIVPIPDAL PPARPEWLLL ALVYWIMAFP QRFGVLTAFI
MGLLLDALYG QLLGQNAIAL AVVAYIVLQI HPRLRVYPVW QQTIVVAVLT ALYKLLALWP
QGAIGLPPGS AWYWAPVATS ALVWPLIFVL LRDMRRRWLL HLS
|
|---|
| |