| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0322 |
|---|
| Symbol | |
|---|
| ID | 8806053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 343319 |
|---|
| End bp | 343864 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | D,D-heptose 1,7-bisphosphate phosphatase |
|---|
| Protein accession | YP_003459573 |
|---|
| Protein GI | 289207507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0153674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCGC GTGCCCTGTT TCTCGACCGC GACGGGGTAA TCAATGTCGA CCATGGCTAT
GTGCATCGGC CCGATCAGGT CGAGTTCGTC TCCGGCATCT TCGAGTTGGT GGCGGCTGCG
ACCGCCCGTC AGTGGCCGGT GGTGGTCGTT ACCAACCAGT CCGGCATTGG CCGCGGCTAT
TACGGTGACC GCGAGTTCCG GCAGCTGACG GACTGGATGC GCGAGCGCTT TGCCGAGCGC
GGCGGCCGCA TCGAGGCCGT CTACCACTGC CCCCATCATC CCCATGATGC GCAGCCCGAC
TATCGTCGTG CCTGTCCGGA TCGCAAGCCG GAGCCGGGCA TGCTGTTGCG GGCGCGGGAT
GATCTGGATC TGGACCTCCC CGGTTCGGTG CTCGTTGGGG ACCGCGCTTC CGACCTCGAG
GCCGCGCGGC GCGCCGGGGT CGGCGCCCGG TTGCTGTTTG ACCCCTTGGG CACGGAACCG
CTACCCGCTG AAGACGGAGC CATCCGTATC CGCGCCTTGC CCGAGGCCAT TGCGTGGCTC
GACTGA
|
|---|
| Protein sequence | MSARALFLDR DGVINVDHGY VHRPDQVEFV SGIFELVAAA TARQWPVVVV TNQSGIGRGY
YGDREFRQLT DWMRERFAER GGRIEAVYHC PHHPHDAQPD YRRACPDRKP EPGMLLRARD
DLDLDLPGSV LVGDRASDLE AARRAGVGAR LLFDPLGTEP LPAEDGAIRI RALPEAIAWL
D
|
|---|
| |