| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0296 |
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| Symbol | |
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| ID | 8806027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 312086 |
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| End bp | 313876 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003459547 |
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| Protein GI | 289207481 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.443396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTT TCTCTCGCCC GCATCCGTTT TCCCTGTCGC ATGCGCACGC GGTTCGGCAG
GTGAGATGGA TCGGGATCCT CCTGGTGCTG CTGGCGTTTC CCCTGGCGGC CGACGAGGAC
GATGGCCCGG TACCGGGTCT GGTGCTGGAA GGCGGCACGG AGTTCCAGCG CGAGAACATT
CGCAACAGCC TCAACCTGGC GCGTCAGCCC TGCGACCTGC CCGGCTTTCG CGAGCGCCGC
CTGCTGCGCG ATACAAAGGA GCGTGCCCGC AATGCCCTGC GCGCCGTCGG CCATTACGAC
GCGGAACTGG ACCTGAGTCT GGAACACGAC GACGACGGCT GCTGGGACCT GCACCTGACG
TTCGACCCCG GCCCTCCGAC CACAGTGGAA ACCATCGACA TCCAGGTCAC TGGCGAGGGG
GTCGGCGATC TGGCGTTCGA GGCCGTGCTC AGCCAGACCG ACATCCAGGA AGGTGATGTC
CTGCGTCATG ACCGCTACGA CACCCTGCGC AATCGCATGA CACGGATTGC GGCGGATCGC
GGTTATTTCG ACGCGGACCT GCACACCCGC CGCCTGGAGG TCGACCGCGA GAACCGCACC
GCGACCATCC GGCTGCACAT GGATACGGGG GATCGCTACC GCATCGGCCG GGTCACGCTG
GACCAGGACA TCCTGGCGCC GGAGTTCGTC GAACGCATGA TCCCGTTCGA GGAAGGCGAT
CCCTACAGCT CCTCGCAGAT CATCGCGCTG CAGCGAAACC TGAATGACTC GGGGTACTTT
TCCGGCGTAC GGGTACGCCC CCTGCGCGAC CAGGCGGAGG ACCGACACGT CCCGATCGTG
GCCGAGTTCG AACCCCGTCG GCGGCACAGC TACGAGGCCG GCATCGGCTA CTCCACCGAC
ATTGGCCCGC GCCTGCGCTT TCGTTTCGAG AATCGCTACG CCAACCAGCT CGGCCATCGC
TATCACGCAG AGCTGGAGGC CTCGCCGGTG CGCTCCGGTG TGGGCTTCAA CTACGCGATA
CCGCTGCGCG ACCCGCTGCG CGAGCAGCTG AACCTGTTCA CAACCTACCG CACCGAGGAC
ACCGATACCC AGCAGTCCGA CCGCTTCCAG GTCGGGGCCA ACCGCGTGCT GCAGCGAACC
GGCGGCTGGC AGACCACTGA GGGCCTGCGC TACGAGTACG AGGACTACAC CGTCGGCGAG
GAAACGGACC GCAGTCGTCT GCTGATCCCT TCCTACCGAA TCGGCCGCAT GGAGGCGGAC
GACCCGATGA CCCCGCGTCG CGGCTACCGC TTCGACATCA CCGTGCAGGG GGCCCAGGAA
GAACTGCTGT CCAGCACCTC GTTCGCGCAG GTACTGGCCA GTGGGAAGTT CGTACGTGCC
ATCGGCCCGG GACGGGTCCT GGCCCGCGCC GATGCCGGAT TCACCGAGGT GGATTCGGTC
CGCGACCTGC CCAGCTCCCT GCGCTTCTTC GCCGGCGGGG ACGCCAGCAT CCGCGGCTAC
GGCTACCAGA AGGTCGGCCC GACCAACGAG GACGGCGACG TGATCGGCGG ACGCCACAAG
GTGGTCGGCA GCCTGGAGTA CGACATCCCG GTACGCGGCA ACTGGAGCGC CGCCGCGTTC
GTGGACGCCG GCAACGTCGT CAACGAATGG ACCGAGTTCG ACCCGGTCTA CGGTGTCGGC
ATGGGCGTGC GATGGCGCTC GCCGGTGGGA CCGATCCGCG TCGACATCGC CCACGGTCCG
GACTCCGATG ACGACTTTCG CATCCACTTC TCCATGGGAC CGGACCTGTG A
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| Protein sequence | MTLFSRPHPF SLSHAHAVRQ VRWIGILLVL LAFPLAADED DGPVPGLVLE GGTEFQRENI
RNSLNLARQP CDLPGFRERR LLRDTKERAR NALRAVGHYD AELDLSLEHD DDGCWDLHLT
FDPGPPTTVE TIDIQVTGEG VGDLAFEAVL SQTDIQEGDV LRHDRYDTLR NRMTRIAADR
GYFDADLHTR RLEVDRENRT ATIRLHMDTG DRYRIGRVTL DQDILAPEFV ERMIPFEEGD
PYSSSQIIAL QRNLNDSGYF SGVRVRPLRD QAEDRHVPIV AEFEPRRRHS YEAGIGYSTD
IGPRLRFRFE NRYANQLGHR YHAELEASPV RSGVGFNYAI PLRDPLREQL NLFTTYRTED
TDTQQSDRFQ VGANRVLQRT GGWQTTEGLR YEYEDYTVGE ETDRSRLLIP SYRIGRMEAD
DPMTPRRGYR FDITVQGAQE ELLSSTSFAQ VLASGKFVRA IGPGRVLARA DAGFTEVDSV
RDLPSSLRFF AGGDASIRGY GYQKVGPTNE DGDVIGGRHK VVGSLEYDIP VRGNWSAAAF
VDAGNVVNEW TEFDPVYGVG MGVRWRSPVG PIRVDIAHGP DSDDDFRIHF SMGPDL
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