| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0287 |
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| Symbol | |
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| ID | 8806018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 300529 |
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| End bp | 301356 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003459538 |
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| Protein GI | 289207472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCG ATCGCCTGAA CCAGGGCAAC TCGACCCGAC GGCTGTTGCT CTCGGCCGTC
GCCTGCTGTG CCTTTCTGGC GCTGACTCCC GCTGGGTCGG CGGCCGAGGA AAACGGCGCG
CTGGAAGGCC ATCTGGACTG GGGCCAGACC TACCGCATCA CGGCCCCGGT GGCCGGCAAG
ATCGAGGCGA TCGAGGTCCG CCCGGGTGAG CATGTCGACC AGGACACCGC CCTGTTCCGC
CTGGATACGC GCAGGGTCGA GGCCGACCTG CGTGCCGCGC AGGCCGCCAT CGAACGTCTG
CAACTGGAAC TGAACGAGGC CAATCGCGAG GTCGAAAAGG CGGAGGACCT GTACGACCAG
ACCCTGATCG CCCTGCGCGA GGTGGAACTG GCACGCATCC AGCAGGCCAC TGTCGCCGCA
CGCCTGGCCG AGGCCCGCGC CCAGCGCGAC CGTGCACGCG CCGATCGCGA CGACGCAACA
ATTCGCGCCC CGGCCAGCGG CCGCATCACG CGCATCGATG TCTCCCCCGG CCAGTTCGTG
AATCCCGCTC TGGCGCCGGC CGTGCTGGCG GTACTTGGAA GCGGCGACTC CATGCGTGTT
CGGGCACTGG TGACACCGGA TCGTATCGGG TCGCTCAGCG AGGGCCAGGA CGTCACGATC
ACCGTTGGCG AACACGAGTT TTCCGGAACA ATCGATCGGA TCGGCTGGGA ACTTGTGGGC
AAAGACGAGG ATCAGAGATA CCGGGTCGAG GCCGAGTTCT CGCCGGGCGA TGATGCCGTA
CTGCGCCCCG GCCAGCCGGC CCGGATCGAA CTTCGTACAA ATTCCTGA
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| Protein sequence | MSIDRLNQGN STRRLLLSAV ACCAFLALTP AGSAAEENGA LEGHLDWGQT YRITAPVAGK
IEAIEVRPGE HVDQDTALFR LDTRRVEADL RAAQAAIERL QLELNEANRE VEKAEDLYDQ
TLIALREVEL ARIQQATVAA RLAEARAQRD RARADRDDAT IRAPASGRIT RIDVSPGQFV
NPALAPAVLA VLGSGDSMRV RALVTPDRIG SLSEGQDVTI TVGEHEFSGT IDRIGWELVG
KDEDQRYRVE AEFSPGDDAV LRPGQPARIE LRTNS
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