Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0285 |
Symbol | |
ID | 8806016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 297811 |
End bp | 300180 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | cytochrome c biogenesis protein transmembrane region |
Protein accession | YP_003459536 |
Protein GI | 289207470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.352123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTCC TGAACCTGCG CAACTGGCTG GCGACCCTCC TGGTCGCATT CCTGCTGACC CCGGGGCTGG CACATGCCAT CTTCGATGAT GATCTGCTGG ACCCGGATGA CGCCTTCAGC CTGAGCGCCG AGGCCATTGA CGCGGACACC ATTCGCCTGA CCTGGGAGAT CGCGGACGGC TACTACATGT ACCGCGAGCA GTTTGAGTTC GAACCCGAGA GCGAAGGGTT GGAGCTCGGC GAACCGAACA TCCCCGATGG CGAGAAGAAG ACCGACGAGT TCTTCGGCGA GGTCGAGACC TATCGCGACG AGGTCAGCAT CGAGCTTCCG ATCCTCGCGG CCGACAGCAC CGAGATCGAA CTGACCGCGC GCTCTCAGGG TTGCGCCGAC CTCGGCGTGT GCTATCCGCC CCATTTCCAG ACCGTCTCGC TGGAGCTTCC GGGCCTGCCG GGCGAGAACG GTGAAGAGGC GGCCGAAGAA GAGGCCACAG AAGACGAAGC CGCCGACGAG GAACGCAGCG CCCTGGACGA GATGGGCGAC CTCTCGGGCG ACGTGGGCGC CGCCGGCGAT CTGCTCGAGC CGGAAGAGGC CTTTGCCGCC TCTCTCGAAG CGATCAGCCA AAACGCGGTC ATCCTGCGCT TCGAAATCGC CGAGGACTAC TACCTCTACC GCGATCAGCT CGACGTGCGC ATCGCCGAAG GCGACGGGAT CGAGCTGGGA CCGGTCAACC CGCCCGAGGG CGAACGTCAC GAGGACGAGT TCTTCGGCGA GACGGAGATC TATCGCGATC AGGTCGAGAT CCTCGTCCCC GTGCTGCGCG ACGAGGACGA CGTCTCCGAG ATCACCCTGG CGATTGACTA CCAGGGCTGC TGGGACGGCG GTGTGTGCTA CCCGCCGCTG ACGCAGGAGG TCTCGGTCAG CTTCGACGCG GATCTGGCCA CCGAAGTCGA CGAGGACGCC CTCCCGGAGA CCGGCGACGA GGCCCTGGAC GAGATCGACA CCGCCGAGGC CGCCCCGGAA GAGGCGGACG ACGAGACCGC CGCACCCGTC ACCCAACAGG ACCGCATCGC GGCCCAGCTG GCCGATGGCC AGATCTGGCT GGTGGCGCTG GCCTTCTTCG GCTTCGGTCT GCTGCTGACG TTCACCCCCT GCGTGTTCCC GATGATCCCG ATCCTGTCGA ACATCATCAT CGGGCAGAAG AACCTGACCA CACGCAAGGC ATTCCTGATC TCGCTGGTGT TCGTGCTGGC GATGGCGCTG ACCTACACCA TCGCCGGGGT CTTCGCGGGA CTCGCTGGGG CCAACCTGCA GGCGGCCTTC CAGAACCCCT GGATCATTGG GACCTTCGTC ACCATCTTTA TCGCGCTGGC GATGTCGATG TTCGGCTTCT ACGAACTGCA GATGCCGGCC AGCGTGCAGA GCAAGCTGTC GCAGATCAGC AACCGCCAGG AAGGCGGCAC CTACATGGGC GCCGGGATCA TGGGCTTCCT GTCGGCCCTG ATCGTCGGTC CGTGCGTAAC CGCGCCGCTG ATTGGCGCCC TGCTCTACAT CAGCCACACC GGCGATGCGG TACTGGGCGG CATCGCCCTG TTCTCCCTGA GCATGGGCAT GGGCGCCCCG CTACTGGCGA TCGGCACCTC GGCCGGCCGC CTGCTGCCGA AGGCCGGTCC GTGGATGGAT GCGATCAAGG CGGTGTTTGG CGTCGGCCTG CTGGCCATGG GCATCTGGCT GCTTGAACGG GTGATCCCGG GCGAGGTCGC GATGTTCCTG TGGGCGACCC TGCTGATCGT GACTGCGATC TACATGGGGG CCTTGCGCTC GCTGCCGGAG GGCACCTCGG GCTGGTACAG CCTGTGGAAG GGCCTGGGCG TGGTGATCCT GATCTACGGC ATCCTGCTGA TGATTGGCGC GGCAACCGGC GGCAAGGACG TGTTCCGGCC GCTGGCCAGC CTGAATCAGC CGGTGGCCTC GACCACCGGC GAACAGGGCC CGACGGAGAT GGAGTTCACC AAGATCAACA GCCTGGAGGA CCTCGAGCGC GAGGTCGAAC GCGCGCGCGA GAACGGACAG CCGGTGTTCG TGGACTTCTA CGCCGACTGG TGCGTGGACT GCGTGCGCCT GGAACGCACC ACCTTCCAGG ACCCGCGCGT GATCCGGGCG ATGGCCGATG TTCATCTGCT CAAGGCGGAC GTAACCGAGA ACACCTCGGA ACACCGCGAG TTGATGCGCA ACTTCAGCCT GTTCGGCCCT CCCGCGATGA TCTTCTACGA CAGCGATGGC AACGAGTTGC GCAACTACCG TAATGTTGGC TACCTGAATG CCGATCGCTT CCTGGCCCAT GTGGAAAGCG CCATCGGGGT AACGCCATGA
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Protein sequence | MHLLNLRNWL ATLLVAFLLT PGLAHAIFDD DLLDPDDAFS LSAEAIDADT IRLTWEIADG YYMYREQFEF EPESEGLELG EPNIPDGEKK TDEFFGEVET YRDEVSIELP ILAADSTEIE LTARSQGCAD LGVCYPPHFQ TVSLELPGLP GENGEEAAEE EATEDEAADE ERSALDEMGD LSGDVGAAGD LLEPEEAFAA SLEAISQNAV ILRFEIAEDY YLYRDQLDVR IAEGDGIELG PVNPPEGERH EDEFFGETEI YRDQVEILVP VLRDEDDVSE ITLAIDYQGC WDGGVCYPPL TQEVSVSFDA DLATEVDEDA LPETGDEALD EIDTAEAAPE EADDETAAPV TQQDRIAAQL ADGQIWLVAL AFFGFGLLLT FTPCVFPMIP ILSNIIIGQK NLTTRKAFLI SLVFVLAMAL TYTIAGVFAG LAGANLQAAF QNPWIIGTFV TIFIALAMSM FGFYELQMPA SVQSKLSQIS NRQEGGTYMG AGIMGFLSAL IVGPCVTAPL IGALLYISHT GDAVLGGIAL FSLSMGMGAP LLAIGTSAGR LLPKAGPWMD AIKAVFGVGL LAMGIWLLER VIPGEVAMFL WATLLIVTAI YMGALRSLPE GTSGWYSLWK GLGVVILIYG ILLMIGAATG GKDVFRPLAS LNQPVASTTG EQGPTEMEFT KINSLEDLER EVERARENGQ PVFVDFYADW CVDCVRLERT TFQDPRVIRA MADVHLLKAD VTENTSEHRE LMRNFSLFGP PAMIFYDSDG NELRNYRNVG YLNADRFLAH VESAIGVTP
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