| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0274 |
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| Symbol | |
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| ID | 8806005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 287317 |
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| End bp | 289689 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_003459525 |
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| Protein GI | 289207459 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.565405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.249222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TTCTCAAGAT TTTTGCGGCG TTGCTGGCGC TGATCCTGGC GGCCGGAATC
GGCGTATCCG CAGCCATTGC GGCCCTGTAC GTGCACTACG CCCCGACCCT CCCCGAAGCG
GAGGCGGTGC GCGACGTGCG CCTGCAAACC CCGCTGCAGG TCCGCACCGC GGACGGCCTG
CTAATGGGCG AGTTCGCAGA AGAACGCCGC ATCCCCCTGC CGATCGAGGA CATCCCCGAG
CGCGTCCGCC AGGCCTTCAT CGCGGCCGAG GACGAGCGCT TCTACGATCA TCCCGGGGTC
GACATCGTTG GCCTGGCCAG AGCGGCGATC AACGAGATCT CCACTCGCGG CGAACGCAGC
CAGGGGGGTT CCACGATCAC CATGCAGCTG GCGCGCAACG TGTTCCTGAC GCGTGACCGC
ACCTACGAGC GCAAGCTGCG CGAGATCTTC CTGGCCATTC GCATGGAACA GGAGATGACC
AAGGACGAGA TCCTCGAGCT GTATCTGAAC AAGATCTACC TGGGCCAGCG CGCCTACGGG
ATCGAGGCCG CCGCCCGGGT CTATTACGGA CGCTCCATCG ACGAACTGGA GCTGGACGAG
ATCGCGGTGC TCGCAGCCCT GCCGAAGGCC CCCTCCACGA CCAACCCCGT CGCCAGCGCC
CAGCGCGCCG AGATCCGCCG CAATTACGTG CTGCGACGTA TGCTGGACAC CGGCGCGATC
AGCGACTCGG AGTACGAAGA GGCGGTGGCG CGCCCGGTTT CGTCCGAGCG ACACGTGGCC
GCGACCGAGG TCGACGCCCA CTGGGTGGCG GAGGCGGCCC GCCAGATCGT CTTCAATCTC
TGGGGCGAGG ACGCCTATCG GCGCGGCCTG CAGGTGCATA CCTCCATCGA CTCCCGCTAC
CAGGAAGCCG CCAACCAGGC CCTTCGCGAA GGTCTCCTCG AATACGACGA ACGCCACGGT
TACCGCGGGC CCGAGGGTCG ACTTGGCGAC GAGGTGATGG CCGACGCCGA GGCCCGCGAA
CGTGCGCTGA AGGCACAGGG CGTGCATGGG CGCCTGTTGT TCCCAGCGGT CGTCATGGAA
CGCGAAGGTG ACGGCACGCT GCAGGTCGAC GGCGGCCAGA TCGGCGAGCT CACCATCGAA
CCCCGCGACC AGGAATGGGC ACGCACCCCC GAGTTCGAAC GGGGCGACGT GATCCGCGTC
AGGCCCTATA CCGACGGGCG CTGGCGCCTG GCGCAAAAAC CCGAGGTGAC CGGCGCGGTG
ATCGCCCAGT CGCCGGCCGA TGGGGCTATC GTTGCGCTCG CGGGGGGCTT CGATTTCTTC
GAGAATCGCT ACGATCGCAG CACCCAGGCG CAACGGCAGC CCGGCTCCGC ATTCAAGCCG
CTGGTGTACG CGCTGGCATT GCAGGATGGC TACCGCCCGG ATGGCGTCCT GGTCGATGCC
CCGATGGTTT TTGACGATCC GGCACTCGGG GCCGAGTGGC GTCCACAGAA CTACTCCCGG
CAGTTCCAGG GCGAGATGAG CATGCGCGAT GCCCTTGCCC AGTCACGCAA TCTGGCATCG
ATCCGCCTGC TCAACAGCCT GGGACCGCAG CGCGTGCACG AACAGCTGCC GCGCTTCGGC
CTGGATCCGG ACAAGCACCC GAGCAACCTG TCGATGGTGC TCGGCACCGG TGCGGTCACA
CCCCTGCAAC TGAACAATGC CTACGGGGTG TTCGCCTCCG GCGGCAAGCT GCACAGCCCG
TGGATCATCA CGCGCATCGA GACGGACGAC GGCGAGGTCC TCTACACAGC CCCGACCGAA
CGCGCCTGCC CCGAACCCTG CGAGAACCCG GCCGGCCAGG ACCTGTACCT GAACGCCAGC
GGGGGTCCGC TGCAGTATAC CGACCCGGCA CAGGTGCTGG ACCCGGGTGC CGCCTGGCAG
ATGAGCAACA TGCTGGGGCA CGTAATCACC GCAGGAACCG GGCGTCAGGC GCAGCAGCTG
GGACGCTCGG ATCTCGCCGG CAAGACCGGC ACGACCAACA GCTATCGCGA TGCCTGGTTC
TCGGGGTTCA ACGCCGACAT CGTCGCGACC GCCTGGGTCG GGTTCGACGA CAACCGCGAA
CTGGGCCGGC GCGAGAGTGG TGGGCGCACG GCGCTCCCGC TCTGGATTCG ATTCATGGAC
TCAGTGCTGA CCGACACACC GGAGCGCCCC GTGGAACGTC CCGATGACCT GCAGCGCGTG
GCAATCCTGC CAGACGGCCG CCGCGCACCA AGCGAGGAGA CCCCGGGGGC GAATATCCAG
TGGCTGATCC CGCAGCAGGT ACCGGAACGC GGCCAGGCCC CGGCGGGCCC CCGCGGGGAG
AATGGTCAGG GCCCGGCCGA GTCGGTGTTC TGA
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| Protein sequence | MKPILKIFAA LLALILAAGI GVSAAIAALY VHYAPTLPEA EAVRDVRLQT PLQVRTADGL
LMGEFAEERR IPLPIEDIPE RVRQAFIAAE DERFYDHPGV DIVGLARAAI NEISTRGERS
QGGSTITMQL ARNVFLTRDR TYERKLREIF LAIRMEQEMT KDEILELYLN KIYLGQRAYG
IEAAARVYYG RSIDELELDE IAVLAALPKA PSTTNPVASA QRAEIRRNYV LRRMLDTGAI
SDSEYEEAVA RPVSSERHVA ATEVDAHWVA EAARQIVFNL WGEDAYRRGL QVHTSIDSRY
QEAANQALRE GLLEYDERHG YRGPEGRLGD EVMADAEARE RALKAQGVHG RLLFPAVVME
REGDGTLQVD GGQIGELTIE PRDQEWARTP EFERGDVIRV RPYTDGRWRL AQKPEVTGAV
IAQSPADGAI VALAGGFDFF ENRYDRSTQA QRQPGSAFKP LVYALALQDG YRPDGVLVDA
PMVFDDPALG AEWRPQNYSR QFQGEMSMRD ALAQSRNLAS IRLLNSLGPQ RVHEQLPRFG
LDPDKHPSNL SMVLGTGAVT PLQLNNAYGV FASGGKLHSP WIITRIETDD GEVLYTAPTE
RACPEPCENP AGQDLYLNAS GGPLQYTDPA QVLDPGAAWQ MSNMLGHVIT AGTGRQAQQL
GRSDLAGKTG TTNSYRDAWF SGFNADIVAT AWVGFDDNRE LGRRESGGRT ALPLWIRFMD
SVLTDTPERP VERPDDLQRV AILPDGRRAP SEETPGANIQ WLIPQQVPER GQAPAGPRGE
NGQGPAESVF
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