| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0271 |
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| Symbol | |
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| ID | 8806002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 284196 |
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| End bp | 285599 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | glutamate synthase, small subunit |
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| Protein accession | YP_003459522 |
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| Protein GI | 289207456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0925346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCA ATCCGATGCA GTTCCTGGAC CTGCCGCGCC AGGACCCTCA GAAGACTCCC
GCCGAGATTC GTATCCACGA GTTTGGCGAG ATCATTGGTC AGTTCGACCC GGCGACCGCG
GGGCAGCAGG CGGGCCGCTG CCTGGCCTGT GGCAATCCGT ATTGCGAATG GAAGTGCCCG
GTTCACAACT TCATCCCGAA CTGGCTGAAG CTGGTGGAAG AGGGCAACCT GTTCGCCGCC
GCCGAGCTCT CGCACAAGAC TAATTCCCTG CCCGAGGTCT GCGGCCGCGT CTGCCCGCAG
GACCGCCTGT GCGAGGGCGC CTGCACGCTG AACGACGGTT TTGGCGCGGT CACCATCGGC
TCGGTGGAGA AGTACATTAC CGACGAGGCC CTGAAGGCCG GCTGGCGCCC GGACCTGTCC
GATGTCACCC CGACCGACAA GCGCGTGGCC GTGATTGGCG CCGGGCCGGC CGGCCTTGGC
TGCGCCGATA TCCTGGCGCG CAACGGCGTG CAGGCAGTGG TCTATGACCG CTACCCGGAG
ATCGGTGGCC TGCTGACCTT CGGTATCCCG CCGTTCAAGC TCGAAAAGCA GGTGATCCGC
ACCCGCCGCG AGATCCTCGA GGGCATGGGC GTGGAGTTCC GCCTGAATAC CGAGATCGGC
CGCGACATCC AGATGGACAC CCTGCTGGAG GAATACGACG CCGTGTTCCT CGGCATGGGC
ACGTACACCG CGATGCAGGG TGGCTTCCCC GGCGAGGACA TGCCGGGGGT GTACCCGGCG
CTGCCGTTCC TGATCTCCAA TATCCGCCAG GTGATGGGCT GGGAGCACGA TGAAGACGGC
TTCATCGACG TGGCCGGCCA GCGTGTGGTG GTCCTTGGCG GTGGCGACAC CGCGATGGAC
TGCAACCGCA CCTCGATCCG CCAGGGCGCG GCCTCGGTGA CCTGCGCCTA TCGCCGCGAC
GAAGAGAACA TGCCCGGCTC GCGCAAGGAA GTGGTGCATG CCCGCGAAGA GGGCGTGCAG
TTCGAGTTCA ACGTGCAGCC GGTCGAGATC GTCGGCGACG GCAAGGTCGA GGGCGTGAAG
GTGGTGCGCA CCCAGATGGG TGCGCCGGAC GAGCGCGGCC GCCGCCGTCC GGAGCCGGTG
CCGGGCTCCG AGCATGTGAT CCCGGCCGAC CGCGTGCTGA TCGCCTTTGG TTTCCGTCCG
TCCCCGGCGG ACTGGTTCGC CGAATACAAG ATCGGCGTGG ACGAGGGCGG GCGTGTACAG
GCCGTCGGTG AGCACGCCTT CCAGACCGGC AACCCGAAGG TTTTTGCTGG CGGCGACATG
GTGCGTGGCT CGGACCTGGT TGTGACCGCC GTCTTCGAGG GCCGCGAGGC CGCCGAAGGC
ATCCTTGAAT ACCTCGGCGT TTGA
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| Protein sequence | MASNPMQFLD LPRQDPQKTP AEIRIHEFGE IIGQFDPATA GQQAGRCLAC GNPYCEWKCP
VHNFIPNWLK LVEEGNLFAA AELSHKTNSL PEVCGRVCPQ DRLCEGACTL NDGFGAVTIG
SVEKYITDEA LKAGWRPDLS DVTPTDKRVA VIGAGPAGLG CADILARNGV QAVVYDRYPE
IGGLLTFGIP PFKLEKQVIR TRREILEGMG VEFRLNTEIG RDIQMDTLLE EYDAVFLGMG
TYTAMQGGFP GEDMPGVYPA LPFLISNIRQ VMGWEHDEDG FIDVAGQRVV VLGGGDTAMD
CNRTSIRQGA ASVTCAYRRD EENMPGSRKE VVHAREEGVQ FEFNVQPVEI VGDGKVEGVK
VVRTQMGAPD ERGRRRPEPV PGSEHVIPAD RVLIAFGFRP SPADWFAEYK IGVDEGGRVQ
AVGEHAFQTG NPKVFAGGDM VRGSDLVVTA VFEGREAAEG ILEYLGV
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