Gene TK90_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0260 
Symbol 
ID8805990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp267353 
End bp268234 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionYP_003459511 
Protein GI289207445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.314535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCT GCATCACGAC GCTGGCGAAG AAGGCTCCGG TGAAGCGGGT GTGTGATCTG 
CTGGAGGTGA ACCGGTCGGG CTACTACGCG GCGCAGACGC GCCGCCGGCG GCCGCGCCAG
CCGTGTGCAC TGGAGGCACG GGTCAAGGAG GCGTTCGAGC AGTCGGAATG GACCTACGGC
AGCCGCCGTG TGCAGGCCGC CCTGCGTTCG GACGGTGTGA CGGTGGGCCG CTACCGGGTC
CGCCGTCTGA TGCGGGAACA GGGCCTGCGC CCGGTCTGGA AGCGGGCGTT CGTCGTGACC
ACCCAGCGGG ATGCGACCGC GCCGGTGGTG GAAAACCACC TGGACCGGCA GTTCCAGCCA
TCGCGCCCGA ACGCGGCCTG GGTGACGGAT ATCACCTACA TCCGGACCCG CACCGGCTGG
ACGTATCTGG CGGCGGTGCT GGACCTGTTC AACCGCAAGG TGGTGGGCTG GTCCATGAGC
CGAAGGCTGG ATGCCGAGTT GGCCTGCAGT GCGCTACGCA TGGCGCTGCA GAGCCGGCAA
CCCGAGCCGG GGCTGCTGGT GCACTCCGAC CAGGGCTGTC AGTACACCAG CGACGCCTGG
CGGCGTCTGC TGGTGCAGCA CGGCGCCCGG GCCAGCATGA GCCGGCGGGG TAACTGCTGG
GACAATGCGG TGGCCGAGCG CTTCTTCCTG AACCTGAAGA CGGAGCGCGT CTGGCGACGG
GACTATGCCA ATCACGGCGA GGCCACCCGG GACATCACCG ACTACATCGT CGGCTTCTAC
AACGAGCGCC GAAGGCACTC AACCCTGGGC TACCTGTCGC CCAACGCCTA CGAGCGAAAA
TGGACAGCCG AACCTCCTAT CGAGGTGTCC GAAATCGCTT GA
 
Protein sequence
MVRCITTLAK KAPVKRVCDL LEVNRSGYYA AQTRRRRPRQ PCALEARVKE AFEQSEWTYG 
SRRVQAALRS DGVTVGRYRV RRLMREQGLR PVWKRAFVVT TQRDATAPVV ENHLDRQFQP
SRPNAAWVTD ITYIRTRTGW TYLAAVLDLF NRKVVGWSMS RRLDAELACS ALRMALQSRQ
PEPGLLVHSD QGCQYTSDAW RRLLVQHGAR ASMSRRGNCW DNAVAERFFL NLKTERVWRR
DYANHGEATR DITDYIVGFY NERRRHSTLG YLSPNAYERK WTAEPPIEVS EIA