| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0252 |
|---|
| Symbol | |
|---|
| ID | 8805982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 258721 |
|---|
| End bp | 259302 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_003459503 |
|---|
| Protein GI | 289207437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0319112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCGA CCGAGCATCA GGTCCTGCGT ACGGACGCCG CGGGTATGCC ACTGGAATGG
ATCGGCCTGG AACAGGCCGT GCGCCTCTAC TACACCGAGC AGGTCGCCTA CGCCTGCGGG
AGTCTGCTGT ATCGCGTGCG CGGGGGCATC AACGCCCGCA CCGGGCTGCA GTCCCGGGTC
GAGGTCAACT CGATCATCGC CACCTTCGGC ACCCGCCAGT CCCGCTTCAA TCACTATATC
CCGCCGCTCA ACAACACCAC GCTGTTTCGC CGCGACGCGC ATCTGTGCCT GTACTGCGGC
CAGCACTTTT ACGAGCGCGA TCTCTCGCGC GACCACGTCA CCCCGATCAG CCAGAACGGG
GCCGATACCT GGAACAACGT GGTGACCGCC TGCAAGCGCT GCAATAACCA CAAGGCCGGC
CGCACCCCCG AGCAGGCCGG CATGCAGCTG CTGGCGATCC CGTTCACGCC CACCCACGCG
GAATACATCT ACCTGAAAGG CAAGCGGGTG CTGGCCGACC AGATGGAGTT CCTGCTGGCG
CACTTCCCCC GGACCAGCCC CCTGCGCGGC CGCCTCGGCT GA
|
|---|
| Protein sequence | MLPTEHQVLR TDAAGMPLEW IGLEQAVRLY YTEQVAYACG SLLYRVRGGI NARTGLQSRV
EVNSIIATFG TRQSRFNHYI PPLNNTTLFR RDAHLCLYCG QHFYERDLSR DHVTPISQNG
ADTWNNVVTA CKRCNNHKAG RTPEQAGMQL LAIPFTPTHA EYIYLKGKRV LADQMEFLLA
HFPRTSPLRG RLG
|
|---|
| |