| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0245 |
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| Symbol | |
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| ID | 8805975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 246581 |
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| End bp | 250504 |
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| Gene Length | 3924 bp |
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| Protein Length | 1307 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003459496 |
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| Protein GI | 289207430 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.389003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG CCGGCCCGGA CCTGGACGCC CTGGCGAGGA CCGTGGAGGC CCTGCCGCAG
GGCCGCGAAC GCCGCGAACT GGGCGAACTG CTGCGCCGGG CCCGCCAGCG GCACAAGCGC
GGCCAGCCCT GTGACCGGCT CGTCTCCACC CTGACCGAAC GCCTTGCACG CGCCGAACAG
GGCGGCGCCG AACGCCAACA CCTGCGCCCG CAGCCCACTT ACGCCGGCGA CCTGCCGATC
CACGCCGAAC GCGAACGCAT CGTCGCCGCC ATCCGCGAGC ATCCGGTGTT GGTGCTGTGC
GGCGAGACCG GCTCCGGCAA GACCACCCAG CTACCCAAGC TGTGCCTGGA GGCAGGGCGC
GGCGAGACGG GGCTGATCGG CCACACCCAG CCGCGCCGCA TCGCCGCGCG TTCGGTGGCC
AGCCGCATCG CCGAGGAGCT CGGCACCACG CTGGGCGGCG ACCGGAATTC CACCGTCGGC
TTCAAGGTGC GCTTCTCCGA CCAGACGGGG CCGAACAACT GGGTCAAGCT GATGACCGAC
GGCATGCTGC TGGCGGAGCT GGCACATGAC CCGGAGCTGC GCGCCTACGA CACCCTCATC
GTCGACGAGG CGCACGAGCG CAGCCTGAAC ATCGACTTCC TGATGGGCGT ACTCAAGCGC
CTGTCGAAGA AGCGCCCGGA GCTGCGCATC ATCATCACCT CGGCGACGCT GGACCCGGAG
CGCCTGTCCG CATTCTTCGA CGACGCCCCG ATCCTGACCG TGGCCGGACG CACCTACCCG
GTGGAGCTGC GCTACCGCCC AATCGAGCCC GAAGACGCCG ACGAGGACAA TTCCACAGAA
CGCGGCGAAC GCGACCTGTT CGACGGCATC CGCGACGCGG TGGCGGAATG CGAACGCGCC
GGCCCCGGCG ACATCCTGGT GTTCCTGCCC GGCGAGCGCG AGATCCGCGA CGCCCACAAG
GCCCTGCGCG GCCAGGTGCG CGCCGACACC GAGGTCCTGG CGCTGTACGC CCGCCTGTCC
GCGCGCGAGC AGGCGCGGGT GTTCCAGTCG CACAGCGGGC GGCGCATCGT GCTGGCCACC
AACGTCGCCG AGACCGCGCT GACCGTCCCC GGCATCCGCT TCGTGATCGA CTCCGGGCTG
GCCCGTATCT CGCGCTACTC CTGGCGCTCG CGCGTGCAGC GCCTGAGCCT GGAGCCGATC
TCGCAGGCTG CCTGCGACCA GCGCGCCGGG CGCTGCGGCC GCCTGGGCCC GGGCATCTGC
ATCCGCCTGT TCTCGGAGGA CGATTACAAC CTGCGCCCGC CGTTCACCGA CCCGGAGATC
CAGCGCTCCA ACCTCGCCTC CGTCATCCTG CAGATGGCCG CGCTGAAGCT GGGCCAGCCA
CGCCAGTTCC CATTCGTGGA TCCACCCGAT CCGCGCCTGG TCAAGGACGG CTACCGCCTG
CTGGAGGAGC TGGGTGCAGT GGACACGCGC GGGCGCACCA CCCCGCGCGG CCGCCAGCTG
GCGCGCATGC CCATCGACCC GCGCCACGGC GCGATGCTGC TGGCCGGAGC CGATCATGGC
TGCGTGACCG AGACCGCGAC CATCGCCGCC TTCCTGTCGC TACAGGACCC GCGCGAGCGC
CCGGCCGAGG CCACTCAGGC GGCGGACCAG GCCCACCGCG AGTTTCAGGT CGAGGGCTCC
GACTTCATGG GTATGCTGCG GCTGTGGGAG GCCTGGCACA CGGCCCGCGA GGACCTCGGC
TCGAATGCCC TCAAGCGCTG GTGCCGCGAG CACTTCCTCA ACTTCCTGCG CATGCGCGAA
TGGCAGGAGC TGCGCGTGCA GCTGCTGCGC CTGGCCCGAG AGATGGACCT GAAGCCAAAC
CACCAGCCCG CCGACGCCGA GCCCGTGCAC CGCGCCCTGT TGACCGGGCT GGTCAGTCAG
ATCGGCCAGA AGACCGAGCG CGGCGACTAC CTCGGCGCAC GCAACCGCCG CTTCCAGATC
CATCCCGGAT CGGTCCTGGC GAAGAAGAAG CCCGCCTGGG TGATGAGCGC GGAGATCGCC
GAGACCACCC GTGTCTACGC CCGCGACAAC GCCCGCATCG AGCCCGACTG GATCCTGGCC
GCGGCGCCGC ACCTGCTCAA GCACCACATC TTCGAGCCGC ACTTCCAGCG CCGCAGCGGG
CGCGTCGGGG CCTTCGACCG CATCACCCTG TACGGCCTGG TCGTGGCCCC GAAAAAGCCG
GTGGACTTCG CGAAGCACGA CCCGTCCGAG GCGCGGCGTA TCCTGATCCG CGAGGGCCTG
GTCGGCGGCG AGCTGCGCAC CCGCTCGAAG GGGGTGCAGG CGAACCGCGA GGCGGTGGCC
GAGATCGCCG AGCAGGAGGC GCGCGGGCGC CGGCGCGACC TGCTGGTGGA GGAAGACCGG
CTGTTCGACT TCTACGACGC CCGCCTGCCG GCGGACATCA CCGACGGCAC GAGCTTCGAG
ACCTGGGCGC GCAAGGCCGA GAAGCAGGAC CCCGACGCCC TGCGGATCGA CCGCGCGGAG
CTGCTGAACG AGCCGGACGC CACCCTCCCG CAGGGCGCCT ACCCGGACCA CCTGGAGCTC
GAGGGCCTGC GCCTGCCACT GGCCTATCGC TTCGAGCCGG GTCAGCCGGA TGATGGCGTG
ACCGTCACCA TCCCCATCGC CGCGCTGAAC GCGGTGCCCG ACTGGCTGGG CGACTGGCTG
GTACCGGGGT TGCTGGAGGA ACGCGTGACC GGCCTGTTGA AGAGCCTGCC CAAGGGCCTG
CGCCGGCAGT TCGTACCCGC GCCGGATTTT GCAGCCGCCG CCCTGGCGCG GATCGAACAC
CGCCAGGGCC CGCTGATCCC GGCGCTGGCC GAGGCCCTGC GCGCGATGAC CGGCACCGAG
ATCCCGCTGG ATGCCTGGCG CCCGGAGACC CTGGAACCGC ACTTGGTGAT GCGCTTTCGC
ATCCTCGACC CGGAGGGCCA GGAGCAGGCC AGCGGCCGCA ACCTGGCCGC GCTGAAGCGC
CGGCTGGGCG GCAGCGCCGA GGCCCACTTC GACGCCAGCC GCCCGGACGA GATCACCCGC
GAGGGCATCA CCGAATGGGA CTTCGGCGCG CTGCCGGAGA GTGTCGAGTT CGACCACCAG
GGCGCCCAGC TGCGCGCCTT CCCGATCCTG GTCGACCGCG GTGATGCCGT CTCGCTGGAG
CTGGAACCCG ACCCCGCGAA GGCCGAACGC GCTCACCGCG CCGGCCTGCG CCGGCTGTTC
CTGCTGAGCG CGCGCAAGAC CGCCCGCGAC CTGCGCCGCC AGCTCCCGGA GATCGAACGC
GCCTGCCTGA ACTACTCGAC GCTCGGCAGC TGCGAGGCCC TGCGCGACCA GATCCTGGAG
GCCGCGGCCG ACCGCGTATT CCTGGCCGAA CCGTGGCCGC GCGATGCCGA GGCCTTTCGA
GAGCGCCTGG AGGCCCGCCT GCCCGAGTTC TCGCCCACGG TGATGGAGCT CTCGCGCCTG
GCCGCCGAGA TCCTGCGCCA CTGGCACGAC CTGCGCACCC GGCTGCAGGG GGATCTGCCG
CTGTCCTGGA TCGAGGCCGC ACGCGACATC CGCGGTCAGC TCGAGGCGCT GGTCCCGGCC
GATTTCCTGC TGCGCACCCC GCATGACGTG CTGCCCGAGC TGCCGCGCTA CCTGCAGGCA
ATCGACAAGC GCCTGGAACG CCTGACCCAG GCCCCGGACA AGGACCGCGC CCGGCGCGTG
GCGGTCGAGC CGCTGTGGCA GCAGGCACAG GAGCTGATCG CGCGGGCGCC GGACCACCCG
GACGTGCTCG CCTTTCGCTA CCGCATCGAA GAGTTCCGCG TGTCGCAATT TGCCCAGGAG
CTGGGCACCC GCGAGAAGGT GTCGCCGAAG CGGCTGGAAC GCGAATACGC AGATGTGATC
CAACGCCTGG CCAGTGGCAC ATGA
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| Protein sequence | MAAAGPDLDA LARTVEALPQ GRERRELGEL LRRARQRHKR GQPCDRLVST LTERLARAEQ
GGAERQHLRP QPTYAGDLPI HAERERIVAA IREHPVLVLC GETGSGKTTQ LPKLCLEAGR
GETGLIGHTQ PRRIAARSVA SRIAEELGTT LGGDRNSTVG FKVRFSDQTG PNNWVKLMTD
GMLLAELAHD PELRAYDTLI VDEAHERSLN IDFLMGVLKR LSKKRPELRI IITSATLDPE
RLSAFFDDAP ILTVAGRTYP VELRYRPIEP EDADEDNSTE RGERDLFDGI RDAVAECERA
GPGDILVFLP GEREIRDAHK ALRGQVRADT EVLALYARLS AREQARVFQS HSGRRIVLAT
NVAETALTVP GIRFVIDSGL ARISRYSWRS RVQRLSLEPI SQAACDQRAG RCGRLGPGIC
IRLFSEDDYN LRPPFTDPEI QRSNLASVIL QMAALKLGQP RQFPFVDPPD PRLVKDGYRL
LEELGAVDTR GRTTPRGRQL ARMPIDPRHG AMLLAGADHG CVTETATIAA FLSLQDPRER
PAEATQAADQ AHREFQVEGS DFMGMLRLWE AWHTAREDLG SNALKRWCRE HFLNFLRMRE
WQELRVQLLR LAREMDLKPN HQPADAEPVH RALLTGLVSQ IGQKTERGDY LGARNRRFQI
HPGSVLAKKK PAWVMSAEIA ETTRVYARDN ARIEPDWILA AAPHLLKHHI FEPHFQRRSG
RVGAFDRITL YGLVVAPKKP VDFAKHDPSE ARRILIREGL VGGELRTRSK GVQANREAVA
EIAEQEARGR RRDLLVEEDR LFDFYDARLP ADITDGTSFE TWARKAEKQD PDALRIDRAE
LLNEPDATLP QGAYPDHLEL EGLRLPLAYR FEPGQPDDGV TVTIPIAALN AVPDWLGDWL
VPGLLEERVT GLLKSLPKGL RRQFVPAPDF AAAALARIEH RQGPLIPALA EALRAMTGTE
IPLDAWRPET LEPHLVMRFR ILDPEGQEQA SGRNLAALKR RLGGSAEAHF DASRPDEITR
EGITEWDFGA LPESVEFDHQ GAQLRAFPIL VDRGDAVSLE LEPDPAKAER AHRAGLRRLF
LLSARKTARD LRRQLPEIER ACLNYSTLGS CEALRDQILE AAADRVFLAE PWPRDAEAFR
ERLEARLPEF SPTVMELSRL AAEILRHWHD LRTRLQGDLP LSWIEAARDI RGQLEALVPA
DFLLRTPHDV LPELPRYLQA IDKRLERLTQ APDKDRARRV AVEPLWQQAQ ELIARAPDHP
DVLAFRYRIE EFRVSQFAQE LGTREKVSPK RLEREYADVI QRLASGT
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