Gene TK90_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0232 
Symbol 
ID8805962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp237040 
End bp237621 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003459483 
Protein GI289207417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0970667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA CCCCCTCGCA GATGATCGAA CTGGGCACCG AGGCCCCGAA CTTCTCCCTG 
CCGGACGTCG TCTCCGGCGA CACCATCAGC CTCGACAGCT TTCCCGACGC GAAAGGCTAC
ATGATCGCCT TCATCTGCAA TCACTGCCCA TTCGTGCAAC TGATCCGCCA CGAGTTCGCG
CGCTACGGCC GCGAGTACTC CAACAAGGGC ATCGCGGTGA TCGCGATCAA CTCCAACGAC
ATCCAGGCCG TGCCAGATGA TGCCCCGGAC AAGATGAAGG ATGACGCCCG CCGCTTCGGT
TACAACTTCC CCTATTGCCT GGACGAGGAC CAGTCCGTGG CCAAGGCCTA CCACGCGGCC
TGCACCCCGG ACCTGTACCT GTTCGATGCC AACCGCAAGC TGTTCTATCG CGGCCAGTTC
GACGAGACCC GCCCCGGCTC TGACAACCCG GTGACGGGGC GTGACCTGCG CGCCGCCAGC
GATGCCCTGC TGGCCGGGCA GCCCGCCCCC GAGCCGCAGC ACCCGAGCCT CGGCTGCAAC
ATCAAGTGGC GTCCGGGCAA CGAGCCGGGC TACTACGGCT GA
 
Protein sequence
MARTPSQMIE LGTEAPNFSL PDVVSGDTIS LDSFPDAKGY MIAFICNHCP FVQLIRHEFA 
RYGREYSNKG IAVIAINSND IQAVPDDAPD KMKDDARRFG YNFPYCLDED QSVAKAYHAA
CTPDLYLFDA NRKLFYRGQF DETRPGSDNP VTGRDLRAAS DALLAGQPAP EPQHPSLGCN
IKWRPGNEPG YYG