| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0228 |
|---|
| Symbol | |
|---|
| ID | 8805958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 233982 |
|---|
| End bp | 234974 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_003459479 |
|---|
| Protein GI | 289207413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.596034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.2022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATA TTGGCGTTGA TGTTAGCAAG AACAAGCTCG ACTGCATGTG GGTCCGGGAT
CTGGAGGCGG GCAAGGTGAA GCCCAAGGTG TTCCCGAACC GCCAAGACCA GTACCGGGAG
CTGCTGCACT GGCTCGAGCG CAACACCGGC GAGACCCCCG AGGGGCTCCA TGTGTATCTG
GAGGCCACCG GCATCTACCA CGAGCCGCTG GCGTACTGGC TTCATGATCA GGGGGTGCAG
GTCCACGTGC TGAACCCGGC CCAGGTGCGT TCGCATGCCA AGGGCATGGG GGTGCGCAAC
AAGACCGACC GCAAGGACAG CATGATGCTG GCCCGCTACG GCATCGAACG CGCACCACGA
CGCTGGCAGC CCGAACCGCC GGAGGTGCGG GAACTCAAGC GCCTGCTCAG CCGCCTGGAG
GCTCTGGAAC AGGATATGCG GCGCGAAGAG AACCGCCTGG AGAAGGCGCG TTTCAGTGAG
GACACCCTCG CTCAGGCGTC GATCGACAAC GTCCTGCAGG CCCTGCGTGA GGAACACCGT
CGGCTCCAGC AGCAGATCGA CGATCACTTC GACGCCCATC ACCACCTGAA GCGGGATCGG
ACCTTGCTGG AGAGCATCCC CGGCATCGGC CGCGTGCTGT CGGCCTCGAT GACCGCAGCG
CTGCGCAGCC GCGCGTTCAC GAGCGCTCGA CAAGCGGCGG CGTTCCATGG GCTGGCACCG
GTCCTGGAAG AATCGGGGAC CACGGTCCGG CGGCCCTCGC GGTTGGCGAA GATCGGTTCC
AGCCGACTGC GCAAGGCGCT CTACATGGCG GCGGTGGTGG CGACCCGGTA CAACCCGGAC
GTGCGACACC AGCATCAACG TCTGCTGACA CGCGGCAAGG CCAAGATGTC GGCGATCGGG
GCGGCTATGC GCAAACTCCT GCACATCGCC TTCGGTGTGC TCAAATCCCA AACCCCGTAT
CAAGCCCGCC ATGAAACCCC TTGCACCCCG TAG
|
|---|
| Protein sequence | MAHIGVDVSK NKLDCMWVRD LEAGKVKPKV FPNRQDQYRE LLHWLERNTG ETPEGLHVYL
EATGIYHEPL AYWLHDQGVQ VHVLNPAQVR SHAKGMGVRN KTDRKDSMML ARYGIERAPR
RWQPEPPEVR ELKRLLSRLE ALEQDMRREE NRLEKARFSE DTLAQASIDN VLQALREEHR
RLQQQIDDHF DAHHHLKRDR TLLESIPGIG RVLSASMTAA LRSRAFTSAR QAAAFHGLAP
VLEESGTTVR RPSRLAKIGS SRLRKALYMA AVVATRYNPD VRHQHQRLLT RGKAKMSAIG
AAMRKLLHIA FGVLKSQTPY QARHETPCTP
|
|---|
| |