Gene TK90_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0213 
Symbol 
ID8805943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp221916 
End bp222386 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID 
Producttype IV pilus modification protein PilV 
Protein accessionYP_003459464 
Protein GI289207398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.035208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATACC GCTCATCCCC CGCTTTCTTC GTCGCCCGCA CACGCGGCGT CACTCTGATT 
GAGGTGCTGG TCGCGCTGGT GGTGCTATCC ATTGGCGTGA TCGGGCTCGC GGCCTTGCAG
GCGCAGGCAC TCCAGCTCAA CCAGGGCGCG TACATGCGCG CCCAGGCGAC CAACCTCGCC
TATGACATCG CCGATCGCAT GCGCACGAAT CGAGAGGTCG CCCTGGATGG CGCCTATGAC
ACGGATTTCC AGCCACCCCC CGTCTGCGAA GCCCCGGAGG CTGGGGGTGA TCTGGCGAGT
GCCGACCTGG CGCAATGGCG GATGGCACTG GCTTGCGCGC TGCCCGAGGG GCAGGGCCGA
ATCGAACGCG ACGGCGATGT GTTCACCATC ACCATTCGCT GGGACAACCG GCGCCTGGCA
GAGGACGGAG AAGACCCCAT TGAAGTGTTT GTCACGAGGA CCGGCATATG A
 
Protein sequence
MLYRSSPAFF VARTRGVTLI EVLVALVVLS IGVIGLAALQ AQALQLNQGA YMRAQATNLA 
YDIADRMRTN REVALDGAYD TDFQPPPVCE APEAGGDLAS ADLAQWRMAL ACALPEGQGR
IERDGDVFTI TIRWDNRRLA EDGEDPIEVF VTRTGI