Gene TK90_0210 details

Gene Information

• Locus tag: TK90_0210
• ID: 8805940
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. K90mix
• Kingdom: Bacteria
• Replicon accession: NC_013889
• Strand: -
• Start bp: 216829
• End bp: 220353
• Gene Length: 3525 bp
• Protein Length: 1174 aa
• Translation table: 11
• GC content: 66%
• Product: Neisseria PilC domain protein
• Protein accession: YP_003459461
• Protein GI: 289207395

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.0317884
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCCAG GAACCTCCAC ACCAAGAGCT GCACCCCGCC GCGCCCTGGT TGCGGCTGCG 
CTGGGCCTCG CGCTGGCCAG TATGCCAGCG AGCGTGACGG CACAGGTCGC CAACAAGCCG 
CTGTTCCTCA CCGGGCCGGG CCTGCCGCCC AACGTACTGC TGATCCTCGA TAACTCCGAC 
AGCATGCAGG AGGGCCTGAG CCAGGGCCGG GTCGCCCTGG ACTGGGATCA GTGTGCTCCG 
GGCGAGGACC TGGACCCGGA GGCCTGCCCG GCCGGCGCCC GCTACGAAGA CAGCAAGGGC 
AGCATCGTCA AGCGTGTTGG GCGCAGTCTG ATCAATGAAT ACCGGGGCCG TATCAACCTG 
GGACTGATGG CCTATCAGCA GCATCCGCCC AGCAATGCCC GCAACGACGT CTTCATCAGC 
GCGGTCGACG ACCCGGCCGA CCTGGGCACC GTACTCTGGC GCCTGGTCCA CCGCCCGCAT 
GACGTGCGCT ACGCCTCTAC ACCCGAGCCC GCCTTCTACG ATCCAGACCA CGAGGGCCCG 
TGGGATTCGG ACATCAAGCG CTTTCGCGAG CCACATCCCA CCCGCGACGA TGTGTGGGTC 
TTCTATAACG TGGCCGTCCC CGGCTACCAG TGGATCACGG CGGAGGACGG GGCGACCGGC 
TTTCCGGTAC ACGACGAAAC CTGGTTCTGT GAATACGCGG GAAACTTCAC CGAAGACGAT 
CTGTTTCCGT TCGACTGCTA CCGCGATGTC ACCGCGGGTC CCGGCGAGCA GCCCGTCTAT 
TCGAACCAGA TTCCGCTGAA CCTGCTCGGA ACCCTGACCG ACAGCATGCG CCAGCGCGGC 
GTCACGCATT GGGGCGAGCA CATGATCTTC TCCCAGCTCA ACCAGCCGGA ATGGCGTGCC 
AATCACTCGC CGGGGCTTGG CTATCTGCAT GTTCCGATCG GAGGTTTCGA CGCGGACGGG 
AACATCGACC CCGAGCACTG GGAAGCGATC GAGCGCAAGC TGGAACCGCA ACGCCACGAC 
TGGTCACCGG GTGATGGCAA TGTCCTGGTG GATCCGGACT GGCCGCTGAT CGCCGCCGGT 
CTCACGCCAC TCGAGGGCAC GATGCGCACC GCGCGCGACT ACTTCCTCGG GCAAACCGAG 
CACTTCGGGA CTGAACAGGG GAATCTCGAC ACGCCCGAGA TCCCGCGTAG CTGCGATGTC 
AACGCCGCCG TCTGGGTCAC CGACGGCCTG CCATCGGTGC AGGCCGACGG CACCGAGCTG 
GGCGACGACC CGGCCACCGC GATCCGCCAG GCGTCCGATG CGATCGAGGA TTTCCACACC 
ACAACCGACG TGGACACCTA CATCGTGGGC TTCGCGCTGC CCCCCGGCAT CGGCGAACTG 
GACGACGCCA TGCCGGAGAA CCCGCTGGAT CTTCTTGCCG ACTCCGGTGG TACCGGTTCC 
GCATATGACG CGACCAGCGA GGACGGCCTG CTGGACGCCA TGTCACGCGT CTTCGAGAGC 
GTAATCGCGG AGGCGACTGG CAGCTCGGCC GCCGTGGCTG CCAACTCCAC CAGCCTCCAG 
GCCGGATCCG CGATTTTCCA GGCTGGCTTT GACTCCAGCG ACTGGTCGGG CGAGTTGCGC 
GCCTTCCGGC TGCTCGCCCC CGCTGCCGAC AACGAAAGCC TGATCGATAC CAGCCCCGCG 
TGGGATGCCG AATCCAACCT GGCCGCGCCG ACGAATCGCA ACCTGATCAC CTGGGCACCC 
GCAGCGGACC CCGAAGAGGG CCTGCCGGCC TGGAGCCAGG GCAACACCGT ACCCTTCGAG 
TTCGACGCCC TGACGCAGAC CCAGCGGGAT GCCCTGGGCG GCGAAGAGGA CGGCCCCCGC 
CGGCTCGACT GGGTGCGCGG CGACCAGGCC CACGAAGGCT TCGGTGAAGA CCAGTTCCGC 
CCCCGCCAAC GCCTGCTCGG TGACATCGTG CATTCGCGCC CCCTGTTCGT GCATGCGCAG 
GATTTCGGGT ATGGACAGTT CGAGGGTGTG GGCGAGGCAT ACACGGACGC CCTTACGGCC 
TGGTCTTCAG AACGTCCGCT GGTCATGGTC GGAGCCAACG ACGGCAAGTT TCACGCCTTC 
GATGGCCGCC TGCCGTGCCA GACGGATGTC CCCGAGCCGA TTGGCGGCTG CTCGTCCGAG 
GGTGGAAGCG AGGTTTTCGC GCTGATCCCG AACGCGGTGT ACGACGATCT CTCCGAGCTG 
TCGCACCCGA ACTATGATCG TCGCTACGTG CTCGATGGTT CGCCACGCCT TGGTCATGTG 
CATGATGGCT CCGAATGGCG CCGGATCGTC GTTGCCTCCC AGGGCGCGGG GGGCACCGGT 
GTATTCGCCC TGGATGTCGA CCGACAGGAG GTACTGTGGG AGATCGATGC GGAGCATGAC 
GCCTTCAGCA CCTCGCTAGG CCGGGTACTC GGTGACCCGG TCCTCGGACG CGCTGCGAGC 
GGCGACTGGG TAACGATCAT CCCCAACGGC TACGGCAGCA GCCAAGGCCA GGCCTCGCTG 
CTCATCCTGG ATACCCTGAG CGGCGAGATG CTGCTCGAAT GGACACCGAA CCACCCCGAC 
AACGGCGACG ACAACGGCAT GTTTACCCCG GTCCCTGTCG ACAGCAATGG TGACCGCCGG 
ATCGACCGGG TGTATGCCGG AGACCTGGGC GGCAACCTCT GGCGGCTGGA TCTGGGTGGT 
AACGGCCCGG CGCAGTGGGG GGCACCCGGT TTTCTGACCA CTGGCACGCA GACCGCACCC 
TTGTTCCAGG CACGCGATGC AGGCGGGGTG CCACAGCCCA TCACGGCACG CCCGGCCGTG 
GCTCGGGACG ACAGCGGCCA CGTCAATCTG TTCTTTGGGA CCGGGCAGTA TTTCGAGGTC 
GGCGACAACG ACCCGGACAA CATCGGCGTA CAAAGCCTGT ACGGGATCCG CGATACCGAC 
GAAGCATCCG TAACGCGCCC GGAGCTTCTG ACTCAGGAGA TCCTGCACGA GGTGCATGCG 
TTTGGATTCG ACCTGCGCGT CACCAGCGAT CACACCATGG AAGACAACCA TGCCGGCTGG 
GTGATGGACC TGGTCTCACC GCTATTCGGG TTCCAGGGCG AGCGAGTGGT CGAAGATGCC 
CTGATCCGCC ATGGCGACCG TGTCGTCTTC GCGACCCTGA TTCCGGAACC CAGTGATGAT 
CCCTGTGATG TCGGCGGTGG AACGGGCTGG ATTATGGAAT TCGACGCCTT CGGGGGTGGG 
CGCCTGCAGC GGTCGCCCTG GGACCTCAGC GGCGAGGGCT TTGGCGACGA GAGCTTCGTC 
GAGGTCGAGA CCGAAAACGA GGATGGCTCC GTCGAATCGG TCCGTATCCC TGCGCACGGC 
ATTCGCTCTC CGGTCGGTAT CCCCACCCGC CCGACCGTAG TCGAGGACAC CGAGCGCCGT 
GACCGCGAAT ACAAGCTGCC GACCGGATCC GAGGGGCAGG TCTGGCAGAT GCCGGACGAG 
GAACGGCCAG GCTTTACCTG GCGCAGCTGG CGCCAGCTCC GGTAA 

 

Protein sequence

MTPGTSTPRA APRRALVAAA LGLALASMPA SVTAQVANKP LFLTGPGLPP NVLLILDNSD 
SMQEGLSQGR VALDWDQCAP GEDLDPEACP AGARYEDSKG SIVKRVGRSL INEYRGRINL 
GLMAYQQHPP SNARNDVFIS AVDDPADLGT VLWRLVHRPH DVRYASTPEP AFYDPDHEGP 
WDSDIKRFRE PHPTRDDVWV FYNVAVPGYQ WITAEDGATG FPVHDETWFC EYAGNFTEDD 
LFPFDCYRDV TAGPGEQPVY SNQIPLNLLG TLTDSMRQRG VTHWGEHMIF SQLNQPEWRA 
NHSPGLGYLH VPIGGFDADG NIDPEHWEAI ERKLEPQRHD WSPGDGNVLV DPDWPLIAAG 
LTPLEGTMRT ARDYFLGQTE HFGTEQGNLD TPEIPRSCDV NAAVWVTDGL PSVQADGTEL 
GDDPATAIRQ ASDAIEDFHT TTDVDTYIVG FALPPGIGEL DDAMPENPLD LLADSGGTGS 
AYDATSEDGL LDAMSRVFES VIAEATGSSA AVAANSTSLQ AGSAIFQAGF DSSDWSGELR 
AFRLLAPAAD NESLIDTSPA WDAESNLAAP TNRNLITWAP AADPEEGLPA WSQGNTVPFE 
FDALTQTQRD ALGGEEDGPR RLDWVRGDQA HEGFGEDQFR PRQRLLGDIV HSRPLFVHAQ 
DFGYGQFEGV GEAYTDALTA WSSERPLVMV GANDGKFHAF DGRLPCQTDV PEPIGGCSSE 
GGSEVFALIP NAVYDDLSEL SHPNYDRRYV LDGSPRLGHV HDGSEWRRIV VASQGAGGTG 
VFALDVDRQE VLWEIDAEHD AFSTSLGRVL GDPVLGRAAS GDWVTIIPNG YGSSQGQASL 
LILDTLSGEM LLEWTPNHPD NGDDNGMFTP VPVDSNGDRR IDRVYAGDLG GNLWRLDLGG 
NGPAQWGAPG FLTTGTQTAP LFQARDAGGV PQPITARPAV ARDDSGHVNL FFGTGQYFEV 
GDNDPDNIGV QSLYGIRDTD EASVTRPELL TQEILHEVHA FGFDLRVTSD HTMEDNHAGW 
VMDLVSPLFG FQGERVVEDA LIRHGDRVVF ATLIPEPSDD PCDVGGGTGW IMEFDAFGGG 
RLQRSPWDLS GEGFGDESFV EVETENEDGS VESVRIPAHG IRSPVGIPTR PTVVEDTERR 
DREYKLPTGS EGQVWQMPDE ERPGFTWRSW RQLR