| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0208 |
|---|
| Symbol | |
|---|
| ID | 8805938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 216072 |
|---|
| End bp | 216491 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | putative prepilin like protein |
|---|
| Protein accession | YP_003459459 |
|---|
| Protein GI | 289207393 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0480818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTC GGGCCCGGTT CATTCCAGCA GGCTTCACGC TGATCGAGCT GATGGTCGTG
GTCGCGGTGG TGGCGATACT GGCCGCGATC GCCTACCCGT CCTACCAAAA CCACGTCACC
AACACCTGGC GCGCCAACGC CGCAGGCTGC CTGACTGAAA CAGCACAGTC CATGGAGCGC
CGATACACCC GCGAAATGAG CTACGAAGGC GACCTGCCGC AGCGTGGCTG CATGAACGAA
AGCGGCATGC CGGAACGCTA TGACTTCCGC CTGGCCGAGG TCGAACGAGC CGCCTTCCGG
CTCGAGGCCG TACCCCAAGG CGTACAGGCC AGCCGCGACA CCCAGTGCGG CACCCTGACC
CTGAACGAAC GCGGGGAACG CGGCGCAGCA GCCAACGACA ACTCAGGCGA ATGCTGGTGA
|
|---|
| Protein sequence | MNTRARFIPA GFTLIELMVV VAVVAILAAI AYPSYQNHVT NTWRANAAGC LTETAQSMER
RYTREMSYEG DLPQRGCMNE SGMPERYDFR LAEVERAAFR LEAVPQGVQA SRDTQCGTLT
LNERGERGAA ANDNSGECW
|
|---|
| |