| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0202 |
|---|
| Symbol | |
|---|
| ID | 8805932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 210231 |
|---|
| End bp | 212135 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | arginine decarboxylase |
|---|
| Protein accession | YP_003459454 |
|---|
| Protein GI | 289207388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.500667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.147392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCA CGCCCTGGAA TCTGGACGAG GCCCGCGCCA CCTACGGGAT CGATCACTGG
AACGGTGGCT TCTTCGAGGT GAACGCCGCG GGCAATGTGG CGATGCGCCG CGCGGACTGG
CCGGATCACC CCGGCGTGGA CCTGTACGAG CTGGCGGGTC GCCTGCGCGA GGAGCATGTG
GGTCCGCCGG TGCTGGTGCG GTTCCAGGAC GTGCTGGACG GCCGGGTACG CCGCCTGGCG
CGGGCCTTCG ACGCCGCCGC GCGCGAGCTG GAGTACGAAG GCGCGTTCAC CGCCATCTAC
CCGATCAAGG TCAACCAGCA GCGCAGCGTG GTGGACCAGA TCCTGGCGGC CGGCGATCAG
CCGGATGCCG AGGGGCTAAC CCCGCGTGTG GGGCTGGAGG CCGGCAGCAA GCCGGAGCTG
ATGGCCGTAC TGGCGCAGTC GCGCCCGGGT GCGGCGATCA TCTGCAACGG CTACAAGGAC
CGCGAATACG TGCGCCTGGC GCTGATCGGG CGCCAGCTCG GGCACCGCGT GTACATCGTG
ATCGAGAAGC CCTCCGAGCT GGAGGAGGTG ATCCGCCAGG CCGAGGCCAT GCAGGTCGAG
CCGCTGCTGG GCCTGCGCGT GCGCCTGGCC TCGATCGGCA AGGGCAAGTG GCAGAACACC
GGCGGCGAGA AGGCCAAGTT CGGCCTGTCG GCGGCGGACG TGCTGGGCAT CCTGGGGCGC
CTGCGTGGCC TCGGCTGGCT GGACCGGCTG CAATTGCTGC ACTTCCACAT GGGCTCGCAG
ATCGCGAACA TCCGCGACAT CCAGAATGGC ATGGGCGAGG CGGCCAGCTA CTTCGCCGCG
CTGACCGAGG CCGGTGCGGC CCTGCGGGTG GTGGATGTCG GCGGCGGTCT CGGAATCGAC
TACGAGGGCT CGCGTTCGCG CAACGAGTGC TCCATCAACT ATTCGGTGGA GGAGTACGCG
CTGAACATCC TGCGCCCGCT CAAGCGCATC TGCGAGGAGC AGGGCCTGGC CATGCCCGAG
GTCTTCAGTG AGTCCGGCCG CGCCCTGACC GCGCACCACG CGGTGCTGAT CACCAACGTG
ATCGACTGCG AGCCGGCCCC GGGTGATGGC GACGTCCCGC CCGCCGAGAA TGGCGAGCTG
CCCGAGATCG CCGCCATGCG CGCCCTGCTG GAGGACGGCG AGCGCCCGGC CTCCGAGATC
TACCACGATG CCGCCTACGG CCTGTCCGAG GTGCAGGCAC GCTTTGCCCG CGGGATGCTG
TCGCTGGCGG ACCGTGCCCG CGCCGAGGCG ATCTACTTCG CCCTGTGCCA GCGCCTGCTG
GCGCGGCCCG AGGCCCTGCC GGCGGAGATC CACGCGGAAC TGACCGACAA GCTGGCGGAC
AAGGTCTTCT GCAACTTCTC CGTGTTCCAG TCGATCCCGG ACACCTGGGC GATCAACCAG
ATCTTCCCGA TCATGCCGCT GCACCGGCTG GCCGAGCGGC CCACCCGGCG CGCGGTATTG
CAGGACCTGA CCTGCGACTC CGATGGCCAC ATCGAGCACT ACGTGGAGCG CGAGGGCACG
CATACCACGC TCGCCCTGCA CCCGTGGAAC GACCGCGAGC CGTACTACCT CGGCATCTTC
CTGGTGGGCG CCTACCAGGA GATCCTTGGG GATCTGCACA ACCTGTTCGG CGACACGGAT
ACCGTGAACG TTGAGCTGCT GCCCGAGGGC GGGTACCGAC TGGTCGACCC GGAGCGTGGC
GACACCGTCG ACGAACTGCT CTCCTATGTG CACTTTGCCC CGGATGACCT GCGCCGCACC
TTCCGCGCCA AGATCGACGC CGCCGGCCTG CGTGGCGAGG CCGCGGGCCG GCTGCTGGCG
GAGCTGGAAC AGGGCCTGAC CGGCTACACC TATCTCGAGG ACTGA
|
|---|
| Protein sequence | MTVTPWNLDE ARATYGIDHW NGGFFEVNAA GNVAMRRADW PDHPGVDLYE LAGRLREEHV
GPPVLVRFQD VLDGRVRRLA RAFDAAAREL EYEGAFTAIY PIKVNQQRSV VDQILAAGDQ
PDAEGLTPRV GLEAGSKPEL MAVLAQSRPG AAIICNGYKD REYVRLALIG RQLGHRVYIV
IEKPSELEEV IRQAEAMQVE PLLGLRVRLA SIGKGKWQNT GGEKAKFGLS AADVLGILGR
LRGLGWLDRL QLLHFHMGSQ IANIRDIQNG MGEAASYFAA LTEAGAALRV VDVGGGLGID
YEGSRSRNEC SINYSVEEYA LNILRPLKRI CEEQGLAMPE VFSESGRALT AHHAVLITNV
IDCEPAPGDG DVPPAENGEL PEIAAMRALL EDGERPASEI YHDAAYGLSE VQARFARGML
SLADRARAEA IYFALCQRLL ARPEALPAEI HAELTDKLAD KVFCNFSVFQ SIPDTWAINQ
IFPIMPLHRL AERPTRRAVL QDLTCDSDGH IEHYVEREGT HTTLALHPWN DREPYYLGIF
LVGAYQEILG DLHNLFGDTD TVNVELLPEG GYRLVDPERG DTVDELLSYV HFAPDDLRRT
FRAKIDAAGL RGEAAGRLLA ELEQGLTGYT YLED
|
|---|
| |