| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0196 |
|---|
| Symbol | |
|---|
| ID | 8805926 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 205073 |
|---|
| End bp | 206326 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | putative ammonium transporter, marine subtype |
|---|
| Protein accession | YP_003459448 |
|---|
| Protein GI | 289207382 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTG AACAACAAGT TGTCGAACTC GCCTATGCGA TGGACACCTT TTACTTTCTG
GTGGCCGGCG CACTGGTGAT GTGGATGGCC GCGGGCTTTA CCATGCTCGA GGCCGGGATG
GTGCGCACCA AGAGTGTCGC CGAAATCGCT ACCAAGAACA TCGCCCTGTA TTCGATCGCC
AGCATCATGT ACATGCTGAT CGGCTACAAC ATCATGTACG GCGATGGCCT GAGCTCCGTG
ATCCCGAGCC TGGGCTTCCT GATCACGGGT GACAATGCCG TGGGTGACGT GCTGGGTAGC
GATGGCGACA TCTACTACTC CGATCGTGCC GACTTCTTCT TCCAGGTCGT ATTCGTGGCC
ACCGCGATGT CCATCGTCTC GGGTGCCGTG GCCGAGCGGA TGAAGCTGTG GGCCTTCCTC
GCCTTTGCGG TCGTGCTGAC CGGCTTCATC TACCCGATCC AGGGCTTCTG GAGCTGGGGC
GAAGGCTTCC TCGACCAGAT CGGCTACCTC GACTACGCCG GTTCCGGCAT CGTCCACTTC
ACGGGTGCCG CCGCGGCGCT GGCCGGTGTG CTGGTCCTCG GGGCGCGCAA GGGCAAGTAC
GGCAAGGACG GCCAGATCAA CGCGATCCCG GGCTCCAACA TGCCGCTGGC CACCCTGGGT
GTACTGATCC TGTGGCTGGG CTGGTTTGGC TTCAATGGTG GCTCCGAACT GAAGGTCTCG
GACATCGAGT CCGCCAACGC CGTGGCCGCT GTGTTCGCCA ACACCAACCT GGCCGCGGCC
GGGGGTGTGG TCGCCGCCTT GATTACCACC CGTCTGGTGT TCGGCAAGGC CGATCTGACC
ATGGCACTGA ACGGCGCGGT CGCGGGCCTC GTGTCCATCA CGGCGGAGCC GCTGATGCCC
AGCCCGTTCC TGGCGATGAT CATCGGTGCC ATCGGTGGCG TGATCGTGGT GTTCTCGATC
GTCGCGCTGG ACAAGCTGAA GATCGACGAC CCGGTTGGCG CGATCTCCGC GCACGGTACT
GCCGGTATCT GGGGTGTGAT GGCGGTGCTG CTGTCCAACC CGGACGCGAC GTTCTTTGGC
CAGATCGCGG GCCTGCTCGC CATCTTCGCC TTCGTCTTCA CGGCCTCCCT GATTGTCTGG
GCCATCCTGA AGGCCGTGAT GGGTATTCGC CTGAGCGAAG AGGACGAGGA CATCGGTGCC
GACATCACCG AGTGTGGCCT CGAGGCCTAC CCGGAATTCA CCGGGAAGCA GTAA
|
|---|
| Protein sequence | MEIEQQVVEL AYAMDTFYFL VAGALVMWMA AGFTMLEAGM VRTKSVAEIA TKNIALYSIA
SIMYMLIGYN IMYGDGLSSV IPSLGFLITG DNAVGDVLGS DGDIYYSDRA DFFFQVVFVA
TAMSIVSGAV AERMKLWAFL AFAVVLTGFI YPIQGFWSWG EGFLDQIGYL DYAGSGIVHF
TGAAAALAGV LVLGARKGKY GKDGQINAIP GSNMPLATLG VLILWLGWFG FNGGSELKVS
DIESANAVAA VFANTNLAAA GGVVAALITT RLVFGKADLT MALNGAVAGL VSITAEPLMP
SPFLAMIIGA IGGVIVVFSI VALDKLKIDD PVGAISAHGT AGIWGVMAVL LSNPDATFFG
QIAGLLAIFA FVFTASLIVW AILKAVMGIR LSEEDEDIGA DITECGLEAY PEFTGKQ
|
|---|
| |