| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0186 |
|---|
| Symbol | |
|---|
| ID | 8805916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 196754 |
|---|
| End bp | 197272 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_003459438 |
|---|
| Protein GI | 289207372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.721142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAT CCATCTCGCT GTGGTTGACG ATCCTGCTGG TCGTCCCTGT AACGGCCACC
TTTCTATGGG TCGCCTTTTC CCGCCCTGCT GCGGTCGATG CCGGTGATCT GACGGCCCGA
TCCTATCGCC TGCGCGACTG GAGCTTCTGG GTCCTGCTGG CGGTAGTCAC CCCGGTGTTT
CTGTACACCC TCACCCTGAT GCCCTACGGC ACCGATCCGG AGGCCGAGGG GGTGCAAGCC
GTCAACGTGA CCGGCCACAT GTGGCGCTGG GACCTGTCGC AGGACGAGTT TCGCGTCGGT
GAGCCGGTGC AGTTCCGCGT GACCAGCCAG GACGTGAACC ACGGGTTCGC CATCTACGAC
GAGGACATGA CCCTGCTGAC CCAGACCCAG GCGATGCCGG GCTACACGAA CATCCTCGAG
TACACCTTCG AGCAGCCGGG TACCTACCAG GTCCTGTGCC TTGAATACTG CGGCGTCGCG
CATCACGCGA TGGTCGCTGA ACTCACCGTC ACGGAGTAA
|
|---|
| Protein sequence | MLQSISLWLT ILLVVPVTAT FLWVAFSRPA AVDAGDLTAR SYRLRDWSFW VLLAVVTPVF
LYTLTLMPYG TDPEAEGVQA VNVTGHMWRW DLSQDEFRVG EPVQFRVTSQ DVNHGFAIYD
EDMTLLTQTQ AMPGYTNILE YTFEQPGTYQ VLCLEYCGVA HHAMVAELTV TE
|
|---|
| |