| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0167 |
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| Symbol | |
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| ID | 8805897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 171951 |
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| End bp | 172820 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_003459419 |
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| Protein GI | 289207353 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA AGGCCCTGGC AACCGTGCAT GCAGACCTGC CCGTTCCCGT CGGGAACCTG
GACCATTACA TGCAGGCGGT TAGCCGGATC GAGGTACTGG ATCCGGAGCA CGAGCGCGAA
CTCGCCCGGT CGCTGCACGA ACGCAACGAC CTGGACGCGG CGCGCCAACT GATCCTGCAC
AACCTGCGCT TCGTCGTGCA TGTGGCCCGC GGCTACCAGG GCTACGGCCT GCCCCTGGGC
GACCTGATCC AGGAGGGCAA TGTGGGCCTG ATGAAGGCCG TGCGGCGCTT CGACCCGAAC
CAGGGGGTGC GCCTGGTCTC GTTCGCGGTG CACTGGATCC GCGCCGAGAT CCACGAGTTC
ATCCTGCGCA ACTGGCGCAT CGTGAAGGTG GCAACGACCA AGGCGCAGCG CAAGCTGTTC
TTCAACCTGC GCAGCGCCAA GCAGCGTCTG GGCTGGATGT CGAACGACGA GGTCTCCGCC
GTCGCCAGGG ACCTCGGGGT CTCCGAGAAT GACGTCTGGG AGATGGAGCG GCGACTGTCC
AGTCAGGATG CGAGCTTTGA CCCCGCGCCC GACAGCGACG ACGAGCACAC CTACCTGGCC
CCGGCCCAGC GCCTGAGCAT CGAGGACATG AGCGACGACC CGGCGCAGGT GGCCGAGGAC
GAGGACTGGG ATCGCCATTA TCAGGAGCGG CTGGCCAGCA CCCTGGGCGA GCTGGACGAA
CGCTCCCGCG ACATCCTGGC GCGGCGCTAC ATGAGCGAGC CCAAGGCCAC GCTGCACGAA
CTGGCGGCGG AATACGGCGT CTCCGCCGAG CGCATCCGGC AGATCGAGAA CAACGCGATC
AAGCGCATCC GCACCGCCTT CGCCGACTGA
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| Protein sequence | MSSKALATVH ADLPVPVGNL DHYMQAVSRI EVLDPEHERE LARSLHERND LDAARQLILH
NLRFVVHVAR GYQGYGLPLG DLIQEGNVGL MKAVRRFDPN QGVRLVSFAV HWIRAEIHEF
ILRNWRIVKV ATTKAQRKLF FNLRSAKQRL GWMSNDEVSA VARDLGVSEN DVWEMERRLS
SQDASFDPAP DSDDEHTYLA PAQRLSIEDM SDDPAQVAED EDWDRHYQER LASTLGELDE
RSRDILARRY MSEPKATLHE LAAEYGVSAE RIRQIENNAI KRIRTAFAD
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