Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0153 |
Symbol | |
ID | 8805883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 157908 |
End bp | 159104 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | protein of unknown function DUF185 |
Protein accession | YP_003459405 |
Protein GI | 289207339 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.850011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.50101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCGC CGAAACCTAG CACACCCACG CCGGACGACC CGGCTGCCGC CATCGCGCGG CAGATGCACG ACTCCCTGCA ACAGAGTATC GCCGCGCACG GCGGGTTCCT CCCGTTTGTC GATTACATGC ACCAGGCGCT GTATGCGCCG GGGCTCGGCT ATTACGTGAA CGGGGCGCGC AAGTTGGGCG CGGGCGGTGA TTTCGTGACC GCGCCGGAGC TGTCCTCGCT CTTCGGCGAG ACCCTGGCCA GCTGGCTGGC CCCGCTGCTG CGCGACGAAC TGGCGGGCGG CGGGCAGTTG CTGGAGTTTG GCGCGGGCAG CGGCCGGCTG GCCGGCGATG TGCTTGTGAC GCTGCGCGAG CTGGGCGTGG GCTGGCAGTG CTACAAGATC ATCGAGGTCA GCCCGGACCT GCGGGCCGTG CAGCAGGAGC ACCTGGCGGA ACGCCTGGAG CCGGAGGAGT ACGCCCGGGT GGAATGGCTC GATGCCCTGC CCGAGGAGCC GATCCGGGGT GTGGTACTGG CGAACGAGGT GCTCGACGCA CTGCCGGTGG AGCTCTTTCG CTGGCGCGAG GGCCAGCCCT GGCAGATGGG TGTCACAGTG GATGGCGACG GCAGGCTGGT GCTGGCGGAG CAGTCGGCCC CCGAGCCACT GGCGGACGTC GTGCGCGAGC TGCAGGCGGT GCATGGCCCC TGGCCCGACG GATACACCTC CGAGTGGCGT CCGGCTCAGG CGGCCTGGGT TGCGAGCGTG GCCGCTTGTC TGGAGCAGGG TGTAGCGTTG CTGGTCGACT ACGGGTTTCC GCGGGCCGCG TATTACGCCG CGGAGCGCCA CCAGGGCACG CTGGTTGGCT ATTACCGTCA GCAGATGATG CTGGACCCCC TGGCGCAGCC CGGGCTGATG GACCTGACGG CCAGCGTCGA TTTCACTGCG GTGGCCGAGG CCGCGGATGC GGCGGGGCTC GATGTGCTCG GTTATGCCGC GCAGGGCGAG TTCCTGCTGG GTGCGGGCCT GGCGCAGCGC TTCGAGGCGC GCGTCGGCAG TGGCGAGGAT GCCCGCAAGA CCATGCAGGC CGCCCAGGCC GTGCGCATGC TGACCCTGCC CGGAGAGATG GGCGAGCGTT TTCAGGTGAT GACCCTGGGT CGCGCCTGTA CCGCGCTCGA TTTCACCGCG ATCCCCGATC GGCGCGGCCG CCTGTGA
|
Protein sequence | MLPPKPSTPT PDDPAAAIAR QMHDSLQQSI AAHGGFLPFV DYMHQALYAP GLGYYVNGAR KLGAGGDFVT APELSSLFGE TLASWLAPLL RDELAGGGQL LEFGAGSGRL AGDVLVTLRE LGVGWQCYKI IEVSPDLRAV QQEHLAERLE PEEYARVEWL DALPEEPIRG VVLANEVLDA LPVELFRWRE GQPWQMGVTV DGDGRLVLAE QSAPEPLADV VRELQAVHGP WPDGYTSEWR PAQAAWVASV AACLEQGVAL LVDYGFPRAA YYAAERHQGT LVGYYRQQMM LDPLAQPGLM DLTASVDFTA VAEAADAAGL DVLGYAAQGE FLLGAGLAQR FEARVGSGED ARKTMQAAQA VRMLTLPGEM GERFQVMTLG RACTALDFTA IPDRRGRL
|
| |