| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0152 |
|---|
| Symbol | |
|---|
| ID | 8805882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 157115 |
|---|
| End bp | 157876 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003459404 |
|---|
| Protein GI | 289207338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.317588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGAAC ACACACAGGG AGAGCGATCG GAAACCGGCG TGGTGCTGGT CACTGGATCC
GCGCGCCGGG TCGGCGCGAC CATCGTGCGC TGGCTGCACG GCGAGGGCCT GCGCGTGCTC
ATTCACTATC GAGGGTCGCG CGACGACGCT GCCGCCCTGG CCGACTCGCT GAATGCCCGG
CGCGAGGACA GCGCGCGCAT CCTGCAAGCC GACCTGCTGA ACCTGAACGA CATCCAGCGC
CTGGCACGCG AGGCGGAAGA GGCCTGGGGG CGGCTGGATT ACCTGGTCAA CAATGCCTCG
ACCTTCTACG CGACCCCGGT CGGCGCGATC GATACGCAGG CATGGGATGA CCTGGTCGGG
TCCAACCTGA AGGCCCCCAC ATTTCTGACC CAGGCCTGTG CGCCGGCGCT CGCGCGCACC
CGGGGCGCAG TGGTCAACAT CGTGGACATT CATGCCCTGC GCCCGCTGAA GGGTTACCCC
GTGTATTCCG CGGCGAAGGC GGGACTCTGG GCCCTGACCC AGGCCTATGC CCGCGAACTG
GGCCCGGACG TGCGTGTTAA CGGCGTCGCA CCCGGCGCAA TCCTCTCGCC CGAGGATCCG
AACAATGCCG GGACGCACGA AGCGATGGTC GAGCGCACCG CCCTCAAACG CGAGGGCCAC
CCCGACGACA TCGCCCGTAC GGTACGCTTT CTGCTGCTGG ATGCGCCCTA CATCACCGGA
CAGGTGATCC CGGTGGATGG CGGGCGCTCC GCCTCGCAGT AA
|
|---|
| Protein sequence | MTEHTQGERS ETGVVLVTGS ARRVGATIVR WLHGEGLRVL IHYRGSRDDA AALADSLNAR
REDSARILQA DLLNLNDIQR LAREAEEAWG RLDYLVNNAS TFYATPVGAI DTQAWDDLVG
SNLKAPTFLT QACAPALART RGAVVNIVDI HALRPLKGYP VYSAAKAGLW ALTQAYAREL
GPDVRVNGVA PGAILSPEDP NNAGTHEAMV ERTALKREGH PDDIARTVRF LLLDAPYITG
QVIPVDGGRS ASQ
|
|---|
| |