| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0119 |
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| Symbol | |
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| ID | 8805848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 126191 |
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| End bp | 127027 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003459371 |
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| Protein GI | 289207305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGG AATTCACCAA GATGCACGGT CTGGGCAACG ACTTCGTCGT CATCGACGGC
ACGCGCCAGG ACGTCCGGCT CGACGAGGCG ACGCTGCGCC AACTGGCGGA TCGCCACTTC
GGCATCGGCT GCGACCAGAT CCTGCTGGTG GAGCCCCCGG GCGACCCAAC ACAGGCCCTG
TTCCGCTACC GCATCTTCAA TGCCGATGGC TCCGAGGTGG AGCAGTGCGG CAACGGTGCG
CGCTGCTTCG CCCGCTTCGT GCGCGAGCAG GGCCTGACCG AGGCCCGCGA GATCCCGGTC
GAGACCCTGG GCGGACGCAT CGTGCTGCAT GTGGAGGACG ACGAGCACGT GCGGGTCAAC
ATGGGGCAGC CCGTGTTCAC GCCCGAACAG ATCCCGCTGG TCGCCGAACA CGAGGCTGAT
GCCTACACCC TGGACGTGCA GGGCCACGCG ATCACACTGG GCGCGGTGTC CATGGGCAAC
CCCCATGCGG TGCTACTGGT CGACGACGTC GCGAGCGCGC CCGTGACCGA GGTCGGGCCG
CTGATCGAGC GGCACGAGTG CTTCCCGCGC CGCGTGAATG TCGGCTTTGC CGCGCTGCGC
GACCGCACGC ATGTAGACCT GCGGGTATTC GAACGCGGGG TCGGCGAGAC GCTGGCCTGT
GGCAGCGGCG CGGCCGCCGC GATGGCCATT CTGCGCCGAC GCAACCTCGT CGACGACGAG
GTTGAAGTCT CGCTGCCGGG CGGTACCCTT GTGCTAAGCT GGAACGCACA GGCCGAAGCC
CCGGTTTGGC TAACCGGACC GGCCACCACG GTTTTCAACG GCTGGATCGA TCTATGA
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| Protein sequence | MRLEFTKMHG LGNDFVVIDG TRQDVRLDEA TLRQLADRHF GIGCDQILLV EPPGDPTQAL
FRYRIFNADG SEVEQCGNGA RCFARFVREQ GLTEAREIPV ETLGGRIVLH VEDDEHVRVN
MGQPVFTPEQ IPLVAEHEAD AYTLDVQGHA ITLGAVSMGN PHAVLLVDDV ASAPVTEVGP
LIERHECFPR RVNVGFAALR DRTHVDLRVF ERGVGETLAC GSGAAAAMAI LRRRNLVDDE
VEVSLPGGTL VLSWNAQAEA PVWLTGPATT VFNGWIDL
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