| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0116 |
|---|
| Symbol | |
|---|
| ID | 8805845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 123814 |
|---|
| End bp | 124356 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_003459368 |
|---|
| Protein GI | 289207302 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.940208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACAGT TTCGCGGCAC CACCATCGTA TGCGTCCGCA AGGACGGCGC CGTCACCCTC
GGGGGCGACG GCCAGGTATC CCTTGGCAAC ACCGTAATGA AGGGCAACGC GCGCAAGGTG
CGCCGCGTCT ATCACGACCG CATACTCGCC GGTTTTGCCG GCGGCACCGC CGATGCCTTT
ACCCTGTTCG AACGCTTCGA GGGCATGCTG GAAAAGCACT CCGGCAACAT CACCCGCGCG
GCCGTCGAAC TGGCCAAGGA CTGGCGCACC GACCGCGCCC TGCGCCGGCT GGAGGCATTG
CTGGCCGTCT CCGACCGCGA CAACTCCTTC GTGATCTCCG GCAACGGCGA CGTGATCGAG
CCCGAGAACG CCCTGATCGC AATCGGCTCC GGCGGCCCCT ACGCCCAGGC CTCCGCGCAG
GCGCTGCTGC AGAATACCGA CCTGTCGGCC CGCGACGTCG TGGAGAAATC GCTGAACATC
GCCGCCGACA TCTGCGTGTA CACCAATCAC AACATCACCC TGGAGAGCCT GGACGCCGAA
TAA
|
|---|
| Protein sequence | MEQFRGTTIV CVRKDGAVTL GGDGQVSLGN TVMKGNARKV RRVYHDRILA GFAGGTADAF
TLFERFEGML EKHSGNITRA AVELAKDWRT DRALRRLEAL LAVSDRDNSF VISGNGDVIE
PENALIAIGS GGPYAQASAQ ALLQNTDLSA RDVVEKSLNI AADICVYTNH NITLESLDAE
|
|---|
| |