| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0097 |
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| Symbol | |
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| ID | 8805826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 105078 |
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| End bp | 107879 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | 2-oxoglutarate dehydrogenase, E1 subunit |
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| Protein accession | YP_003459350 |
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| Protein GI | 289207284 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.413523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA TGCCCTCGCT GCACCGGCTG GATACGCCGG TCTCCGGACA GGAGCTACAC
CCGGACAACC TGCTTTTCGC CGAGACCCTG CTGGAACGCT ACCGCGAGGA CCCGGAGTCG
GTTCCGCCAG CCTGGGCCGA CTACTTCCGC TCGCTGGAGA GCGCGCCGCG TCGAGAGCGC
CGTCGGCGTT CCAGCGATCG TCCGGATCTG GCCCATGAGC AGTTGCAGAT CCGGGTGCTG
CAGTTCATCA ACTCCTATCG CTACCTGGGC CACTTCGGGG CGCGCCTGGA TCCGCTGGAG
CGCGCGGCCC CCGAGCCGCC CGTGGAGTTG AGCCGGGAGT ACCACGGCCT GGACCGGGTC
GGCCCGGAGA TCCTGTTCGA CCCCGGTTCC CTGTTCATCG AGGGCCCGGT CTCGCTGGAC
ACGATCGAGC GGGTACTGCG CGAGACCTAC TGCGCGAGTA TCGGTGCCGA GTACATGCAC
ATCGCGGCGA CCGAGGAGAA GCGCTGGTTG CAGGAGCGGC TGGAGTCGGT TCATGGGCAC
TTCGGCTTCG GCGACGAGAC GCGGCTGGCC ATCCTCGAAC GCCTGACGGC GGCCGAGGGG
CTGGAGCGCT ATCTGCATCG GCGCTATGTC GGACAGAAGC GCTTCTCCCT GGAAGGGGCG
GAGAGCCTGA TCCCGCTGCT GAATGCGCTG GTCCAGCGCG GTGGTGCGCG CGGGCTGCAG
GAGGTCGTCC TGGGCATGGC GCATCGTGGG CGCCTGAATG TGCTGGTCAA CCTGTTCGGC
AAGGCCCCTG CGGATCTGGC CGGCGAGTTC GAGGGCCGCC CGCGCGACGA CCGGGGTACC
GGGGACGTCA AGTACCACAT GGGCTTCTCC TCGAATGTCG AGACGCCTGG CGGCCCGATC
CATCTGGCGC TGGCGTTCAA CCCCTCGCAT CTGGAGATCG TGACGCCCGT GGTAGAGGGA
TCGGTGCGCG CCCGCCAGGT GCGCATCGGC GACCGCAAGG GCAGTCGGGT GATGCCCGTG
GTGATCCATG GCGATGCCGC CTTCGCCGGA CAGGGCGTGG TCATGGAAAC CCTGAACATG
TCCCAGACCC GGGGCTTCTC CACCAAGGGC ACGGTGCACG TGGTGGTGAA CAACCAGATC
GGATTTACCA CATCGACCCT GAAGGACGCA CGTTCGACAC ATTACGCGAC CGACGTCGCC
AAGATGGTGA ATGCGCCGAT CCTGCACGTG AACGGCGACG ACCCCGAGGC TGTGGTATTC
GTCACCCAGG TCGCGTTGGA CTACCGCATG CGCTTCGGCA AGGACGTAGT GATCGACCTG
GTCTGTTACC GCCGCCAGGG GCATAACGAG GCCGACGAGC CGGCCGCCAC GCAGCCGCAC
ATGTACCGCC GTATCCGCGA CCTGCCGACC ACCCGCGAGC TTTATGCCCG CACACTAATC
GAGGCCGGGT TGACCGAGGA GAAGACCCAG GACGAGGCGT TCGAGGCCTA TCGCGCCCGC
CTGGATGCCG GCGAGCCAGT GGCCCTGTCG CTGCACGACG ACGGGCATGG CACCACAACC
AACTGGGCGC CCTATGTGAA CCAGACCTGG GATCAGGATG TGGAGACGGG CGTGGAGAGC
GCGCGCCTGT CGCGTATGCT CGGCCAGCTA TCGACACCGC CGGAGGGTTT TCAGGTCCAC
CCGCGTGTGC AGAAAATCCT CGACGCCCGC TGCGCGATGG CAGCAGGCGA ACAGCCGCTG
GACTGGGGCG CGGCCGAGAC GCTGGCCTAC GGCACGCTGA TCCAGGACGG CTACCGTATT
CGCCTGTCCG GTCAGGACTC CGGGCGCGGT ACATTCTTCC ACCGCCACGC GGTGCTGCAT
GACCAGGAGA CCGGGAAGGC GCTAGTGCCG CTGCGCCGGC TGGATCCGGA TCACCCGCGC
TTTCTGGTCA TCGATTCGCT GCTGTCCGAG GAAGGCGTGC TCGCATTCGA GTACGGCTAT
TCAACGGCCG CGCCGGAGGC CCTGGTGGTC TGGGAGGCGC AGTTCGGTGA CTTCGTGAAC
GGCGCGCAGG TGGTGATCGA CCAGTTCATT TCTTCCGGCG AGCAGAAGTG GGGCCGTCTG
TGCGGGCTGA CGCTGCTGCT GCCGCATGGT TACGAGGGGC AGGGTCCGGA GCATTCCTCG
GCCCGGCCCG AGCGCTTCCT GCAACTGGCG GCGCAGGAGA ACATGCAGGT CTGTGTACCG
ACCACACCCG CGCAGATTTT CCATCTGCTG CGCCGGCAGA TGGTACGCCC CTACCGCAAG
CCGCTCGTCG TGATGACGCC TAAGAGTCTG CTGCGGCACC AGGATGCGGT CTCCGATCTC
GCGGCGCTGG CGCACGGTCA GTACCAGACG GTCATCGACG ACGCACGCAT CGAGGACCCC
CAGGCCGTCA AGCGTGTGTT GCTGACCAGC GGGCGCATCT ACTATGACCT TGCTTCAAGC
CAGTCCGAGG GGCAGCACTG GGATGTCGCG ATCCTGCGCC TGGAGCAGTG CTACCCGTTC
CCTGAAGAGC GTCTTACCGA ATTGCTGGGA CGCTACCCGC ACGCGGAGGA GTTCGTCTGG
GTGCAGGACG AGCCGGAGAA CCAGGGCTAT CTGGGATTCC TGGCGCCGCG CATCAATCCA
CTGCTGACGG TGCGTGGTCA GACGCTGCAC GCAGTCGCGC GGCCCCCGGC CGCCGCGCCG
GCGGTCGGCT ACCCGGAGGT TCACAAGGCG CAGTTGAAGG ATCTGCTCGA ACGCGCGTTC
GGTCCGATCA GCTCGCGCGA TACCCCGCAC CCCACGCCCT GA
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| Protein sequence | MNDMPSLHRL DTPVSGQELH PDNLLFAETL LERYREDPES VPPAWADYFR SLESAPRRER
RRRSSDRPDL AHEQLQIRVL QFINSYRYLG HFGARLDPLE RAAPEPPVEL SREYHGLDRV
GPEILFDPGS LFIEGPVSLD TIERVLRETY CASIGAEYMH IAATEEKRWL QERLESVHGH
FGFGDETRLA ILERLTAAEG LERYLHRRYV GQKRFSLEGA ESLIPLLNAL VQRGGARGLQ
EVVLGMAHRG RLNVLVNLFG KAPADLAGEF EGRPRDDRGT GDVKYHMGFS SNVETPGGPI
HLALAFNPSH LEIVTPVVEG SVRARQVRIG DRKGSRVMPV VIHGDAAFAG QGVVMETLNM
SQTRGFSTKG TVHVVVNNQI GFTTSTLKDA RSTHYATDVA KMVNAPILHV NGDDPEAVVF
VTQVALDYRM RFGKDVVIDL VCYRRQGHNE ADEPAATQPH MYRRIRDLPT TRELYARTLI
EAGLTEEKTQ DEAFEAYRAR LDAGEPVALS LHDDGHGTTT NWAPYVNQTW DQDVETGVES
ARLSRMLGQL STPPEGFQVH PRVQKILDAR CAMAAGEQPL DWGAAETLAY GTLIQDGYRI
RLSGQDSGRG TFFHRHAVLH DQETGKALVP LRRLDPDHPR FLVIDSLLSE EGVLAFEYGY
STAAPEALVV WEAQFGDFVN GAQVVIDQFI SSGEQKWGRL CGLTLLLPHG YEGQGPEHSS
ARPERFLQLA AQENMQVCVP TTPAQIFHLL RRQMVRPYRK PLVVMTPKSL LRHQDAVSDL
AALAHGQYQT VIDDARIEDP QAVKRVLLTS GRIYYDLASS QSEGQHWDVA ILRLEQCYPF
PEERLTELLG RYPHAEEFVW VQDEPENQGY LGFLAPRINP LLTVRGQTLH AVARPPAAAP
AVGYPEVHKA QLKDLLERAF GPISSRDTPH PTP
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