Gene TK90_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0052 
Symbol 
ID8805781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp59874 
End bp60338 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID 
ProductRNA methyltransferase, TrmH family, group 2 
Protein accessionYP_003459305 
Protein GI289207239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCACA TCGTCCTTTA TGAACCGGAA ATCCCGCCGA ACACGGGCAA TATTATTCGT 
CTGGCGGCCA ACACCGGGGC GGCGTTGCAC CTGATCCATC CGCTCGGCTT CGAGCTGGAT
AGCGCCCGGG CGCGCCGCGC CGGGCTCGAC TATCACGAGC TGGCCCGGGT GCAAGAGTAT
GACAGCCTCG AACGGTGGCG GGAATCGATC CGGCCGCAGC GCGAGTTCGC CCTGACCACG
CGCGGGCAGG CCCGTTACGA CCAGGCCGGG TTCCAGTCCG GTGATGCCCT GTTGTTTGGG
CCGGAGACCC GCGGACTGCC CCAAGCGGTA CTCGACGCAC TGCCTCCCGA ACAGCGATTG
CGTCTGCCCA TGCAGCCCGA TAGCCGCAGC CTGAACCTCT CCAACGCGGT GGCCGTGGTC
GTCTACGAGG CCTGGCGCCA ACTCGGTTTT CCGGGCGGGG TCTAG
 
Protein sequence
MLHIVLYEPE IPPNTGNIIR LAANTGAALH LIHPLGFELD SARARRAGLD YHELARVQEY 
DSLERWRESI RPQREFALTT RGQARYDQAG FQSGDALLFG PETRGLPQAV LDALPPEQRL
RLPMQPDSRS LNLSNAVAVV VYEAWRQLGF PGGV