| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0044 |
|---|
| Symbol | |
|---|
| ID | 8805773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 50695 |
|---|
| End bp | 53430 |
|---|
| Gene Length | 2736 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_003459297 |
|---|
| Protein GI | 289207231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.812891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA CCTTCCGCAC GGATACCGCA TTGATGTCAC AAGCCCCCCT CGTTCTGGTC
GACGGTTCGT CGTATCTGTT TCGGGCCTTC CATGCCCTGC CGCCGCTGAC CGCGCCGGAT
GGCGCCCCGA CCGGGGCGAT GATTGGTGTG GCGAACATGC TGCGCAAGCT GCGCGCGGAC
TACGGCCCGG AACACATGGC GGTGGTGTTC GACGCGAAGG GCAAGACCTT CCGCGACGAC
ATCTACCCGG AATACAAGGC CACCCGCCCG CCGATGCCGG ACGAGCTGGC CGCCCAGATC
GAGCCGCTGC ACGAACTCGT GCGGGCGATG GGCCTGCCAC TTTTGTGCGT CGAGGGCGTG
GAGGCCGACG ACGTGATCGC GACCCTGGCC GATCAGGCCG CCGCAGCCGG GCATGACGTG
GTGATCTCCA CCGGCGACAA GGACCTCGCC CAGCTGGTGA ATGACCGCAT CACCCTGGTC
AACACCATGA GCGGGGTCAC GCTGGACCGC GAGGGCGTAC AGGAAAAATT CGGCGTGGCC
CCGGAGCAGA TCGTCGACTA CCTCGCGCTG ATGGGCGACA GCGTCGACAA CATCCCGGGC
GTAGACAAGG TCGGCCCCAA GACCGCGGCC AAGTGGATCG CGAAGTACGG CGATCTCGAC
ACCATCCTCG AGCAGGCCGA CGACATCGGC GGCAAGATCG GCGAGAACCT GCGCGCCGCG
GCCGAGCGCC TGCCCACCTC GCGCGAACTG ATCACGGTCA AGCGCGATGT CGAGCTGGAT
GCCGGCCCCA ACGACCTGAA CATCCGCGAG CCGGATCACG AGCGCCTGCT GGAGATGGTG
CGCCGCTACG GCTTCACCCG CTGGCGCGCG GAGCTGGAGG GTAGCGAGGA CGAGGCCGCT
GACGGCAATC CGGGCCCGTC GCAGGCGAAG GGCGACTACC GGACGCTGCG CGAGGAGGCC
GAACTGGCCG AGCTGCTGGA GCGTCTGGAC AAGGCCGACC GAGTCGCCTT CGACACCGAG
ACCACGAGCC TCGACGCGAT GCGCGCCGAG ATCGTCGGCA TGTCCTTCGC CTTCGAGCCG
GGCACCGCGT GGTATCTGCC GCTGGCCCAC ACCGGGCCGG ACGCCGACCC GCAGCTGCCG
CGCGCGGAGA CGCTCGAGCG CCTGAAACCG TGGCTGGAGT CGGAGCGCCA CGGCAAGCTG
GGCCATCACC TGAAGTACGA CCGCAACGTG CTGGGCAATC ACGGCATCAC CCTGCGCGGG
ATCGTCGACG ACACCCTGCT CGAGTCGTTC TGCCTGGATG CCGGGGCCAA CCGCCACGAC
CTCGACTCCC TGGCCGAGCG CCACCTGGAC TACAAGACCA CGCACTACGA GGACGTGGCC
GGCAAGGGGG TGAAGCAGAT CCCGTTCGCC GAGGTGGATA TCGGCATCGC CACCGATTAC
GCCGGCGAGG ACGCTGATAT CTGCCTGCAG CTGGATGCGG TGTTCCAGCC ACGTCTGCAG
GCGGCCGAAG GCCCCGCGTT TGTCTACCGC GAGATCGAGA TGCCGCTGGT CCCGGTGCTG
GCGGATATCG AACGCGTCGG CGTAAAGGTG GACCCGGATC GGCTCGGCGA GCAGAGCCAG
GAGCTGCTGG CCGAGATGGA GCGCATCGAG CGCGAGGCCT TCGAGGAGGC CGGCGGCGAG
TTCAACCTCG GCTCGCCCAA ACAGATCCAG GAGATCCTGT TCGAACGCCT GGGCCTGCCG
GTACTGCGGC GCACACCCAA GGGCCAGCCC TCCACCGCCG AGGACGTGCT GGAGCAGATG
GCGGACGACT ACGCCCTGCC GCGCCTGATC CTCGAGCACC GCGGCCTGTC CAAGCTGCGC
AGCACCTACA CCGAGACCCT GCCCCGGCGC ATCCACCCGG AGACCGGTCG GGTGCACACT
TCCTATCACC AGGCGGGGGC GGCCACCGGG CGGCTGTCAT CCTCGGAGCC GAACCTGCAG
AACATCCCGG TGCGCACCGA GGCCGGCCGG CGCATCCGCC GCGCGTTCAT CGCGGAAGAG
GGCCACCAGC TACTGGCGGC AGACTACTCG CAGATCGAGC TGCGCATCAT GGCTCACCTG
TCGCAGGATG CCGGCCTGCT GAAGGCCTTT GCCGAGGGTC AGGACATCCA CCGCGCAACC
GCCGCCGAGG TCTTCGGGCT GGACCCGGAG CAGGTCTCCG GCGATCAGCG CCGCGCGGCC
AAGGCGATCA ACTTCGGCCT GATCTACGGC ATGTCCGCCT GGGGCCTGGC GCGCAACCTC
GGCATCGAGC AGGGCGAGGC GCGCGAGTAC ATCGACCGCT ACTTCAGCCG CTATCCCGGC
GTGCACGACT ACATGGAACG GGCGCGCGCC TCCGGGCGCG AGAACGGCTA CGTCGAGACC
CTGTTCGGCC GCCGCCTGTA CCTGCCGGAG ATCAACAGCC GCAACGGGGC GCGGCGCCAG
CAGTCCGAGC GTGTCGCGAT CAACGCCCCG ATGCAGGGCA CGGCCGCCGA CATCATCAAG
CGCGCGATGG TACGGGTCGC GCACGACCTC GAGGACACCG GGATTGACGC GCGCATGATC
ATGCAGGTGC ACGACGAACT GGTGTTCGAG GTGGCCGACG CGGCGGTGGA GGACCTGACC
ACGCTGGTGC GCAAGGCCAT GAGCGGGGCC GCCGACCTGG ACGTGGAACT GGTCGTAGAC
GTCGGCGTCG GCGCCAACTG GGACGACGCC CACTAG
|
|---|
| Protein sequence | MARTFRTDTA LMSQAPLVLV DGSSYLFRAF HALPPLTAPD GAPTGAMIGV ANMLRKLRAD
YGPEHMAVVF DAKGKTFRDD IYPEYKATRP PMPDELAAQI EPLHELVRAM GLPLLCVEGV
EADDVIATLA DQAAAAGHDV VISTGDKDLA QLVNDRITLV NTMSGVTLDR EGVQEKFGVA
PEQIVDYLAL MGDSVDNIPG VDKVGPKTAA KWIAKYGDLD TILEQADDIG GKIGENLRAA
AERLPTSREL ITVKRDVELD AGPNDLNIRE PDHERLLEMV RRYGFTRWRA ELEGSEDEAA
DGNPGPSQAK GDYRTLREEA ELAELLERLD KADRVAFDTE TTSLDAMRAE IVGMSFAFEP
GTAWYLPLAH TGPDADPQLP RAETLERLKP WLESERHGKL GHHLKYDRNV LGNHGITLRG
IVDDTLLESF CLDAGANRHD LDSLAERHLD YKTTHYEDVA GKGVKQIPFA EVDIGIATDY
AGEDADICLQ LDAVFQPRLQ AAEGPAFVYR EIEMPLVPVL ADIERVGVKV DPDRLGEQSQ
ELLAEMERIE REAFEEAGGE FNLGSPKQIQ EILFERLGLP VLRRTPKGQP STAEDVLEQM
ADDYALPRLI LEHRGLSKLR STYTETLPRR IHPETGRVHT SYHQAGAATG RLSSSEPNLQ
NIPVRTEAGR RIRRAFIAEE GHQLLAADYS QIELRIMAHL SQDAGLLKAF AEGQDIHRAT
AAEVFGLDPE QVSGDQRRAA KAINFGLIYG MSAWGLARNL GIEQGEAREY IDRYFSRYPG
VHDYMERARA SGRENGYVET LFGRRLYLPE INSRNGARRQ QSERVAINAP MQGTAADIIK
RAMVRVAHDL EDTGIDARMI MQVHDELVFE VADAAVEDLT TLVRKAMSGA ADLDVELVVD
VGVGANWDDA H
|
|---|
| |