| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0025 |
|---|
| Symbol | |
|---|
| ID | 8805754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 30693 |
|---|
| End bp | 31211 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003459278 |
|---|
| Protein GI | 289207212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.209709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCTG TTTCTGCCCA GAACGAACCT CATCGCCCCG CGACGGAAGG GGAACCGGAT
CTGTCGCGTT CCGTGATCCG TCAGCTGCGC GTGATCATCC GCGCCCTGCA GGGGCATTCG
CGGGCAGTGG AGCGTGCCTG CGGGATCAGT GCCTCGCAGT TGTGGGCCCT GTGGGAGCTG
CAGCGCACGC CCGGGCTGAA TGTCAGCGAC CTTTCGCGCC GGCTGTCGGT GCATGCCTCG
ACCACCTCGA ACCTGCTGGA CAAGCTGGAA TACAGCGGGC TCGTCGAGCG CCGCCGCCCG
GAGAAGGACC AGCGCATCGT GCGGCTGTAT GTCACGCCCA AGGGGGAGGC GCTCCTGTCC
GACGCCCCGG CAGCCCCCCA GGGCGAGTTG AACCGCGCGT TGCACGCTCT CCCGCCCGAG
CGGCTGGCGG ATCTGGACGA AGGGCTTACC CTCCTGGTCG AGGCGATGAA CACCACCGAG
CCTCGTGCCG GTCTGCAGCC GTTCGAGGTG AAAACCTGA
|
|---|
| Protein sequence | MSAVSAQNEP HRPATEGEPD LSRSVIRQLR VIIRALQGHS RAVERACGIS ASQLWALWEL
QRTPGLNVSD LSRRLSVHAS TTSNLLDKLE YSGLVERRRP EKDQRIVRLY VTPKGEALLS
DAPAAPQGEL NRALHALPPE RLADLDEGLT LLVEAMNTTE PRAGLQPFEV KT
|
|---|
| |