| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0022 |
|---|
| Symbol | |
|---|
| ID | 8805751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 26288 |
|---|
| End bp | 27316 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | porin Gram-negative type |
|---|
| Protein accession | YP_003459275 |
|---|
| Protein GI | 289207209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.561527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.116595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA AGCACCTGCT GACCAGCCTG ATCGCCGCCG GCCTGGTCGT CCCGGCCCTG
GCCACCGCCG ACTGGACGCT GTACGGCCGC GCCCACCTGT CCGCCGACAT CCTGGACGAC
GGCGCCGACT ACAACGAATT CAACGTCTCC AGCAATGCCA GCCGCCTAGG CTTCAAGGGC
GAGCGCGAGT TCCGCGAACA GCTCATCGCC ATGTTCCAGA TCGAGCAGCA AGTCGACTTC
GACACCGCGG CAGACAATGA ATTGAGCTTT GCCACGCGCG ATACCTTCGT CGGTCTGCGG
GGCGACCAGT GGGGCATGCT GAGGATCGGG AAGTTCGACA CCCCGTTCAA GCGCGCCCGC
GGGCCGGCCA ACTTCTTCGG CGATCAGGTC GGTGACCTGC GCAACCTGAC CCGGTCGCGC
GCCCAGACCG GCCGCTTCGA CGAGCGCTTC AACAACAGCA TCCATTACCA GACGCCCAGC
TTCGGCGGCC TGACCTGGAA CATCCAGTAC TCGAACGAAA CGGACGACGC CACAACCGTG
GACGGGGCTG ATAACAAGGC CTACTCGACC TCGCTGAACC TGAGCCTGGG CGACCTGACC
GGCGCGCTGG CCTACGAAAA GCAGGAAGAC GGTGACGTGA ATCCGGATGC CTGGCGCCTG
GCTGTTGGCT ACCGCATCAC AGAGGCCTTC CGCATCGGCG GCCTCTACCA GAATTCCGAG
ACGGTCAATG GTGACGAGGC GGACGTGTAC GGACTGGGCG GCCAGTTCCG TCTGAGCCCG
AGCATGTACC TGAACGGCCA CGTCTTCCAG CTGGATTCCG ACCTGGACGA TGCCGATGCC
ACGATGTACG CCCTTGGCCT GGAATATCGT ATCGACAGCG ACCTGCGCTT CTACGGCAAC
ATTGCCATGG TCGACAATGA CGATGCCTCG GCTCTGACCC CATGGGGTGC GGCGCGCAGT
TCCGGCCCGG GTGGCGCGAT GGGCGAAAAC GCTACGGCCT TTTCGCTTGG CATGCGTTAC
GACTTCTAG
|
|---|
| Protein sequence | MNRKHLLTSL IAAGLVVPAL ATADWTLYGR AHLSADILDD GADYNEFNVS SNASRLGFKG
EREFREQLIA MFQIEQQVDF DTAADNELSF ATRDTFVGLR GDQWGMLRIG KFDTPFKRAR
GPANFFGDQV GDLRNLTRSR AQTGRFDERF NNSIHYQTPS FGGLTWNIQY SNETDDATTV
DGADNKAYST SLNLSLGDLT GALAYEKQED GDVNPDAWRL AVGYRITEAF RIGGLYQNSE
TVNGDEADVY GLGGQFRLSP SMYLNGHVFQ LDSDLDDADA TMYALGLEYR IDSDLRFYGN
IAMVDNDDAS ALTPWGAARS SGPGGAMGEN ATAFSLGMRY DF
|
|---|
| |