| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0006 |
|---|
| Symbol | |
|---|
| ID | 8805735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 7070 |
|---|
| End bp | 9118 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | Oligopeptidase A |
|---|
| Protein accession | YP_003459259 |
|---|
| Protein GI | 289207193 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.322163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.727066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAACC CCCTGCTGCA AACGGATCGC CTGCCCGCGT TTCGATCCAT CGCCCCGGAA
CATGTCCTCC CTGCCATCGA TACCGTCCTT CAGGAGAATC GCGACGGAAT CGAGGCGCTT
GTTGGACAGG CCGGCGACCA GCCCACCTGG GGTGGCCTGG TCGCACCCCT GCAGCACCTG
GATGCCCGTC TTTCCCAGGT GTGGGCACCT GTCGGGCATT TGAATGCGGT TATGAACAGC
AGCGAACTGC GTCAGGCTTA CAACGCCTGT CTGCCCAAGC TGTCCGAGTT CGGTAGCTGG
GTTTCGCAGC ACCAGGGGCT GTACGCCGCC TTTCGCCGTC TGGCCGATGG CCCCGAATAT
GCCCGGCTCG CGCCCGAGCG GCGCAAGGTC ATCGATGACG CTCTGCGGGA CTTTCACCTC
AGTGGTGTGG ACCTCCCCGA GGATGCGCGC GCCCGCTTGC GGGAGATCGA CGCGCGCCTG
TCCGCACTCA CGGCGCGATT CGAGGAGAAC GTCCTTGATG CGACCCAGTC CTGGACCTGG
CAGACCGACG ATCCGGACGC ACTCGCCGGC ATACCCGCCG CAGAACAGGC CATGCTGGCC
CAGAACGCCC GTGCGCACGA GCGAACCGGG TATCTCGTGA CCCTGGATTT TCCGAGCTAT
TTCGCGGTGA TGAGCCATGC TGACGACCGC GAACTGCGCC GCCGCGTCTA CGAGGCCTTC
GCGACACGGG CATCCGACCA GGGCCCCGAT GCAGGCCGCT TCGACAACAG CGAGGTCATG
GTCGAGATCC TCCAGCTTCG CGAGGAGCAG GCAAGGATCA CCGGATTCGA GCACTACGCG
GAGCGCTCGC TGGCGACCAA GATGGCCGAG ACTGCGGATC AGGTGGACAG CTTCCTTCAG
GATCTGTCCC GGCGGGCCCG TCCTCGGGCC GAGCAGGACC TGGCCGATTT GCGCATCTTC
GCCCGCCAAG AGCTCGGGCT CGACTCCCTG GAAGCCTGGG ACATGGCCTA TGCCGCCGAG
AAGATGCGTG AGCGGCGTCT GGGGCTGAGC CAGGAAATGC TGAAGCCCTA TTTTCCCGCC
AGCCAGGCGG TGGAGGGCCT GTTTCGGCTC GTCGAGCGCC TGTTTGGTGT CCGTTTCGAG
GCCGATCCGA CTGTCGAATG CTGGCATGAC GATGTTCGTT ACTATCGTGT ATTTGATGTG
AACGGGATCG AACGTGCTGG CTTCTACTTT GATCTCTACG CCCGCAAGAA CAAGCGTGGC
GGCGCCTGGA TGGACGTCTG CCGGCAACGC TTTGTCTCGG ACACGGCCCA GCAGGTCCCG
GTCGCGTTCA TGACCTGCAA CTCCACCCCG CCGGTGGATG GCAAGCCTGC GCTTTTTACT
CACGACGAAG TGATCACCCT GTTCCACGAG TTCGGTCACG GCCTTCACCA CATGCTCACG
CGGGTGAACG AGCCGGAGAT CGCCGGCATC AACGGGGTCG AGTGGGACGC TGTCGAACTG
CCGAGCCAGT TCATGGAGAA TTGGTGCTGG GAGCGCGAGG CCCTGGACCT GTTCGCCCGA
CATTACGAGA CCGGTGAGCC TATGCCGGAC GAGCTCTACC AGCGCCTGGT CGATACTCGC
CACTTCCATG CCGCGCTACA GCTCCTGCGA CAGGTGGAGT TCTCCCTGTT CGACATGCGT
CTGCATGCAG GCCCGGCCCC GGAAACGGCT AAGGCCATCC TCGATCTCCT GGAGACGGTG
CGTGACGAGG TTGCGGTGGT CCGGCCGCCG GCCTTCAACC GCTTCCCGCA TGGCTTCGCT
CATATCTTTG CCGGTGGTTA CGCGGCGGGC TACTACAGCT ACAAGTGGGC GGAGGTCCTG
TCCGCCGATG CCTTTGCGCG CTTCGAGGAG GAGGGCCTGT TCTCGCCGGA CGTCGGCGCC
GCCTACCTGC GGGAGATCCT GGAGGTTGGA GCCTCGCGGC CTGCCGCCGA TTCCTTCCGG
GCCTTCCGCG GCCGGGATCC CGAGATCGAC GCCCTGCTGC GCCACAGTGG CCTGGAGGAT
GCCGCGTGA
|
|---|
| Protein sequence | MTNPLLQTDR LPAFRSIAPE HVLPAIDTVL QENRDGIEAL VGQAGDQPTW GGLVAPLQHL
DARLSQVWAP VGHLNAVMNS SELRQAYNAC LPKLSEFGSW VSQHQGLYAA FRRLADGPEY
ARLAPERRKV IDDALRDFHL SGVDLPEDAR ARLREIDARL SALTARFEEN VLDATQSWTW
QTDDPDALAG IPAAEQAMLA QNARAHERTG YLVTLDFPSY FAVMSHADDR ELRRRVYEAF
ATRASDQGPD AGRFDNSEVM VEILQLREEQ ARITGFEHYA ERSLATKMAE TADQVDSFLQ
DLSRRARPRA EQDLADLRIF ARQELGLDSL EAWDMAYAAE KMRERRLGLS QEMLKPYFPA
SQAVEGLFRL VERLFGVRFE ADPTVECWHD DVRYYRVFDV NGIERAGFYF DLYARKNKRG
GAWMDVCRQR FVSDTAQQVP VAFMTCNSTP PVDGKPALFT HDEVITLFHE FGHGLHHMLT
RVNEPEIAGI NGVEWDAVEL PSQFMENWCW EREALDLFAR HYETGEPMPD ELYQRLVDTR
HFHAALQLLR QVEFSLFDMR LHAGPAPETA KAILDLLETV RDEVAVVRPP AFNRFPHGFA
HIFAGGYAAG YYSYKWAEVL SADAFARFEE EGLFSPDVGA AYLREILEVG ASRPAADSFR
AFRGRDPEID ALLRHSGLED AA
|
|---|
| |